Changeset: 932b7bb5709e for MonetDB
URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=932b7bb5709e
Modified Files:
configure.ag
Branch: bamloader
Log Message:
reverting changes that introduce HTS library (and dependent changes)
HTS library is not yet widely available (in particular not on Fedora);
hence, for now we fall-back to using SAMTOOLS;
later, we will "gradually" shift towards using the HTS library.
(Robin, Sjoerd & Stefan)
diffs (12 lines):
diff --git a/configure.ag b/configure.ag
--- a/configure.ag
+++ b/configure.ag
@@ -2363,7 +2363,7 @@ AC_SUBST(MSEED_LIBS, $MSEED_LIBS)
AM_CONDITIONAL(HAVE_MSEED, test x"$have_mseed" != xno)
# hts (required by BAM library), only used by sql
-org_have_bam="yes"
+org_have_bam="auto"
have_bam=$org_have_bam
AC_ARG_WITH(hts,
AS_HELP_STRING([--with-hts=DIR],
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