Changeset: 60db75dc40c7 for MonetDB
URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=60db75dc40c7
Modified Files:
configure.ag
Branch: bamloader
Log Message:
reverting changes that introduce HTS library (and dependent changes) (here:
changeset 4370eb787489)
HTS library is not yet widely available (in particular not on Fedora);
hence, for now we fall-back to using SAMTOOLS;
later, we will "gradually" shift towards using the HTS library.
(Robin, Sjoerd & Stefan)
diffs (12 lines):
diff --git a/configure.ag b/configure.ag
--- a/configure.ag
+++ b/configure.ag
@@ -2368,7 +2368,7 @@ have_bam=$org_have_bam
AC_ARG_WITH(hts,
AS_HELP_STRING([--with-hts=DIR],
[hts (providing bam library) are installed in DIR]),
- [have_bam="$withval"])
+ [have_bam="$withval"], [have_bam="auto"])
if test "x$have_bam" != xno; then
case "$have_bam" in
auto|yes)
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