This probably isn't the best solution but until CMake fixes the bug
and includes the updated FindHDF5.cmake file in the next or future
release this is what you have to do:
Copy the FindHDF5.cmake file from the current CMake distribution that
you are using and place it somewhere in your project folder, say $
{PROJECT_ROOT}/Resources/CMake/Modules.
Then in your CMakeLists.txt file use the following line somewhere
BEFORE you start looking for your libraries:
set (CMAKE_MODULES_DIR ${PROJECT_SOURCE_DIR}/Resources/CMake/Modules $
{CMAKE_MODULE_PATH})
Now, edit the FindHDF5.cmake file (the one that you copied into your
project) to remove the offending lines/fix the bug. The above line
will effectively substitute your corrected version for the one that
ships with cmake. When CMake has a release where the bug is fixed then
you can remove this workaround.
If your fix is general enough attach the corrected file to the bug
report.
Cheers.
___________________________________________________________
Mike Jackson www.bluequartz.net
On Sep 1, 2010, at 9:56 AM, James C. Sutherland wrote:
FYI, I just replicated this on Mac OSX 10.6.4 with HDF5 1.8.2 and
CMake 2.8.1. If I do not have the "hl" libs installed things break
with the same message on the configure step.
James
On Wed, Sep 1, 2010 at 7:51 AM, James C. Sutherland <[email protected]
> wrote:
OS: Linux
CMake: 2.8.0
HDF5: 1.6.3 (yep - that old. I will pester the sysadmins for an
update, but that won't likely solve the problem since the directory
structure didn't really change in the move to 1.8.x as far as I can
tell)
I filed a bug report: #0011195
Let me know if you need any other information in diagnosing the
problem.
James
On Wed, Sep 1, 2010 at 7:30 AM, Michael Jackson <[email protected]
> wrote:
So there is probably a bug in the FindHDF5.cmake file plain and
simple. Can you file a bug report with CMake?
What version of HDF5 are you using? What version of CMake are you
using? What platform are you running on
___________________________________________________________
Mike Jackson www.bluequartz.net
Principal Software Engineer [email protected]
BlueQuartz Software Dayton, Ohio
On Sep 1, 2010, at 9:17 AM, James C. Sutherland wrote:
I was aware of the CMake build for the newer HDF5 releases.
However, I need this to work for users who are not able/willing to
build their own hdf5 libraries from source.
Also, it is certainly not a very good option to ask a user to move
to a CMake build system and then tell them to hack on a
FindHDF5.cmake file just to get a proper link line. Autotools users
scoff at that and tell me that "CMake is too opaque to be usable."
There should be a way of getting this to work...?
James
On Wed, Sep 1, 2010 at 6:27 AM, Biddiscombe, John A.
<[email protected]> wrote:
The latest 1.8.5.x release branch of svn is CMake friendly and you
shouldn’t have this trouble is you’re willing to recompile/install it
Something along these lines will work for an installation on win32
into /program file/HDF5
FIND_PACKAGE(HDF5 "1.8.5" REQUIRED NO_MODULE PATHS
"$ENV{ProgramFiles}/HDF5")
[To fix the problem on the systems without re-installing, just
remove references to hdf5_hl from the FindHDF5 stuff in your cmake
installation module]
JB
From: [email protected] [mailto:[email protected]] On
Behalf Of James C. Sutherland
Sent: 01 September 2010 00:45
To: cmake
Subject: [CMake] FindHDF5.cmake and the "hl" versions of hdf5 libs
I typically have full HDF5 installations on my systems but am now
going to a system where the "hl" versions of the hdf5 libraries are
not installed.
Although I don't need these, it appears that CMake is unwilling to
let me proceed without them. I get the following error:
CMake Error: The following variables are used in this project, but
they are set to NOTFOUND.
Please set them or make sure they are set and tested correctly in
the CMake files:
HDF5_hdf5_hl_LIBRARY_DEBUG (ADVANCED)
linked by target "tabprops" in directory /uufs/chpc.utah.edu/
common/home/u0033394/TabProps/tabprops
HDF5_hdf5_hl_LIBRARY_RELEASE (ADVANCED)
linked by target "tabprops" in directory /uufs/chpc.utah.edu/
common/home/u0033394/TabProps/tabprops
By the way, the installed libraries are found:
-- Found HDF5: debug;HDF5_hdf5_hl_LIBRARY_DEBUG-NOTFOUND;/uufs/
chpc.utah.edu/sys/pkg/hdf5/5-1.6.3-amdopteron/lib/libhdf5.a;/uufs/
chpc.utah.edu/sys/pkg/hdf5/5-1.6.3-amdopteron/lib/
libhdf5_cpp.a;optimized;HDF5_hdf5_hl_LIBRARY_RELEASE-NOTFOUND;/uufs/
chpc.utah.edu/sys/pkg/hdf5/5-1.6.3-amdopteron/lib/libhdf5.a;/uufs/
chpc.utah.edu/sys/pkg/hdf5/5-1.6.3-amdopteron/lib/libhdf5_cpp.a
My CMakeLists.txt file has the following:
set( HDF5_USE_STATIC_LIBRARIES 1 )
find_package( HDF5 COMPONENTS C CXX )
Any idea of how to get fix this problem?
James
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the CMake FAQ at:
http://www.cmake.org/Wiki/CMake_FAQ
Follow this link to subscribe/unsubscribe:
http://www.cmake.org/mailman/listinfo/cmake
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the CMake FAQ at:
http://www.cmake.org/Wiki/CMake_FAQ
Follow this link to subscribe/unsubscribe:
http://www.cmake.org/mailman/listinfo/cmake
_______________________________________________
Powered by www.kitware.com
Visit other Kitware open-source projects at
http://www.kitware.com/opensource/opensource.html
Please keep messages on-topic and check the CMake FAQ at:
http://www.cmake.org/Wiki/CMake_FAQ
Follow this link to subscribe/unsubscribe:
http://www.cmake.org/mailman/listinfo/cmake
