See <https://builds.apache.org/job/beam_PerformanceTests_JDBC/216/display/redirect>
------------------------------------------ GitHub pull request #4392 of commit f811d7ecdc7ee553355418c754e91c538f792c27, no merge conflicts. Setting status of f811d7ecdc7ee553355418c754e91c538f792c27 to PENDING with url https://builds.apache.org/job/beam_PerformanceTests_JDBC/216/ and message: 'Build started sha1 is merged.' Using context: Jenkins: Java JdbcIO Performance Test [EnvInject] - Loading node environment variables. Building remotely on beam4 (beam) in workspace <https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/> Cloning the remote Git repository Cloning repository https://github.com/apache/beam.git > git init <https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/src> # > timeout=10 Fetching upstream changes from https://github.com/apache/beam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/apache/beam.git > +refs/heads/*:refs/remotes/origin/* > git config remote.origin.url https://github.com/apache/beam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # > timeout=10 > git config remote.origin.url https://github.com/apache/beam.git # timeout=10 Fetching upstream changes from https://github.com/apache/beam.git > git fetch --tags --progress https://github.com/apache/beam.git > +refs/heads/*:refs/remotes/origin/* > +refs/pull/4392/*:refs/remotes/origin/pr/4392/* > git rev-parse refs/remotes/origin/pr/4392/merge^{commit} # timeout=10 > git rev-parse refs/remotes/origin/origin/pr/4392/merge^{commit} # timeout=10 Checking out Revision 67a00955447ed25b1b70ed6c5ddde0726665df5d (refs/remotes/origin/pr/4392/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f 67a00955447ed25b1b70ed6c5ddde0726665df5d Commit message: "Merge f811d7ecdc7ee553355418c754e91c538f792c27 into d14d4638d6ad663f438909722c576ec1c8c1f0f7" First time build. Skipping changelog. Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 [EnvInject] - Executing scripts and injecting environment variables after the SCM step. [EnvInject] - Injecting as environment variables the properties content SPARK_LOCAL_IP=127.0.0.1 [EnvInject] - Variables injected successfully. [beam_PerformanceTests_JDBC] $ /bin/bash -xe /tmp/jenkins2405182857192984149.sh + rm -rf PerfKitBenchmarker [beam_PerformanceTests_JDBC] $ /bin/bash -xe /tmp/jenkins5142766251816535034.sh + git clone https://github.com/GoogleCloudPlatform/PerfKitBenchmarker.git Cloning into 'PerfKitBenchmarker'... [beam_PerformanceTests_JDBC] $ /bin/bash -xe /tmp/jenkins5482645758019146846.sh + pip install --user -r PerfKitBenchmarker/requirements.txt Requirement already satisfied: absl-py in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: jinja2>=2.7 in /usr/local/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: setuptools in /usr/local/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 16)) Requirement already satisfied: colorlog[windows]==2.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: blinker>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 18)) Requirement already satisfied: futures>=3.0.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 19)) Requirement already satisfied: PyYAML==3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 20)) Requirement already satisfied: pint>=0.7 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 21)) Requirement already satisfied: numpy in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 22)) Requirement already satisfied: functools32 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 23)) Requirement already satisfied: contextlib2>=0.5.1 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 24)) Requirement already satisfied: pywinrm in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: six in /home/jenkins/.local/lib/python2.7/site-packages (from absl-py->-r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: MarkupSafe>=0.23 in /usr/local/lib/python2.7/dist-packages (from jinja2>=2.7->-r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: colorama; extra == "windows" in /usr/lib/python2.7/dist-packages (from colorlog[windows]==2.6.0->-r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: xmltodict in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests-ntlm>=0.3.0 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests>=2.9.1 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ntlm-auth>=1.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: cryptography>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: idna<2.6,>=2.5 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: urllib3<1.22,>=1.21.1 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: certifi>=2017.4.17 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: cffi>=1.7; platform_python_implementation != "PyPy" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: enum34; python_version < "3" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: asn1crypto>=0.21.0 in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ipaddress; python_version < "3" in /usr/local/lib/python2.7/dist-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: pycparser in /home/jenkins/.local/lib/python2.7/site-packages (from cffi>=1.7; platform_python_implementation != "PyPy"->cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) [beam_PerformanceTests_JDBC] $ /bin/bash -xe /tmp/jenkins2174997670611279815.sh + pip install --user -e 'src/sdks/python/[gcp,test]' Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/src/sdks/python> Requirement already satisfied: avro<2.0.0,>=1.8.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: crcmod<2.0,>=1.7 in /usr/lib/python2.7/dist-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: grpcio<2,>=1.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: httplib2<0.10,>=0.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: mock<3.0.0,>=1.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: oauth2client<5,>=2.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: protobuf<4,>=3.5.0.post1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: pyyaml<4.0.0,>=3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: pyvcf<0.7.0,>=0.6.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: six<1.12,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: typing<3.7.0,>=3.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: futures<4.0.0,>=3.1.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: hdfs3<0.4.0,>=0.3.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: google-apitools<=0.5.20,>=0.5.18 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: proto-google-cloud-datastore-v1<=0.90.4,>=0.90.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: google-cloud-bigquery==0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: pyhamcrest<2.0,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev0) Requirement already satisfied: enum34>=1.0.4 in /home/jenkins/.local/lib/python2.7/site-packages (from grpcio<2,>=1.0->apache-beam==2.3.0.dev0) Requirement already satisfied: funcsigs>=1; python_version < "3.3" in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.3.0.dev0) Requirement already satisfied: pbr>=0.11 in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.3.0.dev0) Requirement already satisfied: pyasn1>=0.1.7 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<5,>=2.0.1->apache-beam==2.3.0.dev0) Requirement already satisfied: pyasn1-modules>=0.0.5 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<5,>=2.0.1->apache-beam==2.3.0.dev0) Requirement already satisfied: rsa>=3.1.4 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<5,>=2.0.1->apache-beam==2.3.0.dev0) Requirement already satisfied: setuptools in /usr/local/lib/python2.7/dist-packages (from protobuf<4,>=3.5.0.post1->apache-beam==2.3.0.dev0) Requirement already satisfied: fasteners>=0.14 in /home/jenkins/.local/lib/python2.7/site-packages (from google-apitools<=0.5.20,>=0.5.18->apache-beam==2.3.0.dev0) Requirement already satisfied: googleapis-common-protos<2.0dev,>=1.5.2 in /home/jenkins/.local/lib/python2.7/site-packages (from proto-google-cloud-datastore-v1<=0.90.4,>=0.90.0->apache-beam==2.3.0.dev0) Requirement already satisfied: google-cloud-core<0.26dev,>=0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: monotonic>=0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from fasteners>=0.14->google-apitools<=0.5.20,>=0.5.18->apache-beam==2.3.0.dev0) Requirement already satisfied: google-auth<2.0.0dev,>=0.4.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: google-auth-httplib2 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: google-gax<0.16dev,>=0.15.7 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: proto-google-cloud-pubsub-v1[grpc]<0.16dev,>=0.15.4 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: grpc-google-iam-v1<0.12dev,>=0.11.1 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: cachetools>=2.0.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-auth<2.0.0dev,>=0.4.0->google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: future<0.17dev,>=0.16.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: ply==3.8 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: requests<3.0dev,>=2.13.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: idna<2.6,>=2.5 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: urllib3<1.22,>=1.21.1 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Requirement already satisfied: certifi>=2017.4.17 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev0) Installing collected packages: apache-beam Found existing installation: apache-beam 2.3.0.dev0 Uninstalling apache-beam-2.3.0.dev0: Successfully uninstalled apache-beam-2.3.0.dev0 Running setup.py develop for apache-beam Successfully installed apache-beam [beam_PerformanceTests_JDBC] $ /bin/bash -xe /tmp/jenkins7074448343416780664.sh + python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.JdbcIOIT_pkb_results --official=true --kubeconfig=/home/jenkins/.kube/config --beam_it_timeout=1200 --benchmarks=beam_integration_benchmark --beam_it_profile=io-it --beam_prebuilt=true --beam_sdk=java --beam_it_module=sdks/java/io/jdbc --beam_it_class=org.apache.beam.sdk.io.jdbc.JdbcIOIT --beam_it_options=--project=apache-beam-testing,--tempRoot=gs://temp-storage-for-perf-tests,--postgresPort=5432,--numberOfRecords=5000000 --beam_kubernetes_scripts=<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/.test-infra/kubernetes/postgres/postgres.yml> --beam_options_config_file=<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/.test-infra/kubernetes/postgres/pkb-config.yml> 2018-01-11 16:27:14,998 37cbdd70 MainThread INFO Verbose logging to: /tmp/perfkitbenchmarker/runs/37cbdd70/pkb.log 2018-01-11 16:27:14,998 37cbdd70 MainThread INFO PerfKitBenchmarker version: v1.12.0-259-g5a6cff9 2018-01-11 16:27:14,999 37cbdd70 MainThread INFO Flag values: --beam_it_class=org.apache.beam.sdk.io.jdbc.JdbcIOIT --beam_it_timeout=1200 --beam_sdk=java --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --beam_it_options=--project=apache-beam-testing,--tempRoot=gs://temp-storage-for-perf-tests,--postgresPort=5432,--numberOfRecords=5000000 --beam_prebuilt --kubeconfig=/home/jenkins/.kube/config --project=apache-beam-testing --beam_kubernetes_scripts=<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/.test-infra/kubernetes/postgres/postgres.yml> --bigquery_table=beam_performance.JdbcIOIT_pkb_results --official --beam_it_module=sdks/java/io/jdbc --dpb_log_level=INFO --beam_options_config_file=<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/.test-infra/kubernetes/postgres/pkb-config.yml> --beam_it_profile=io-it --benchmarks=beam_integration_benchmark 2018-01-11 16:27:15,271 37cbdd70 MainThread WARNING The key "flags" was not in the default config, but was in user overrides. This may indicate a typo. 2018-01-11 16:27:15,271 37cbdd70 MainThread INFO Initializing the edw service decoder 2018-01-11 16:27:15,352 37cbdd70 MainThread ERROR Prerequisite check failed for beam_integration_benchmark Traceback (most recent call last): File "<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 403, in _CreateBenchmarkSpecs check_prereqs(config) File "<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/PerfKitBenchmarker/perfkitbenchmarker/linux_benchmarks/beam_integration_benchmark.py";,> line 102, in CheckPrerequisites raise Exception("beam_it_options must be of form" Exception: beam_it_options must be of form ["--option=value","--option2=val2"] Traceback (most recent call last): File "PerfKitBenchmarker/pkb.py", line 21, in <module> sys.exit(Main()) File "<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 870, in Main return RunBenchmarks() File "<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 777, in RunBenchmarks benchmark_specs = _CreateBenchmarkSpecs() File "<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 403, in _CreateBenchmarkSpecs check_prereqs(config) File "<https://builds.apache.org/job/beam_PerformanceTests_JDBC/ws/PerfKitBenchmarker/perfkitbenchmarker/linux_benchmarks/beam_integration_benchmark.py";,> line 102, in CheckPrerequisites raise Exception("beam_it_options must be of form" Exception: beam_it_options must be of form ["--option=value","--option2=val2"] Build step 'Execute shell' marked build as failure
