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seanfinan pushed a commit to branch main
in repository https://gitbox.apache.org/repos/asf/ctakes.git
The following commit(s) were added to refs/heads/main by this push:
new f84c3e5 Deprecation message in old dictionary ae. Removed imports of
deprecated classes in Assertino classes.
f84c3e5 is described below
commit f84c3e515f062ce8706e7ee20ce38034c582fcd4
Author: Sean Finan <[email protected]>
AuthorDate: Wed Dec 28 13:21:37 2022 -0500
Deprecation message in old dictionary ae.
Removed imports of deprecated classes in Assertino classes.
---
.../java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java | 1 -
.../apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java | 1 -
.../apache/ctakes/dictionary/lookup/ae/DictionaryLookupAnnotator.java | 3 +++
3 files changed, 3 insertions(+), 2 deletions(-)
diff --git
a/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java
b/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java
index c1a6099..c3f82f9 100644
---
a/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java
+++
b/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java
@@ -51,7 +51,6 @@ import org.apache.uima.fit.component.NoOpAnnotator;
import org.apache.uima.fit.factory.*;
import org.apache.uima.fit.pipeline.JCasIterator;
import org.apache.uima.fit.pipeline.SimplePipeline;
-import org.apache.uima.fit.util.CasIOUtil;
import org.apache.uima.fit.util.JCasUtil;
import org.apache.uima.jcas.JCas;
import org.apache.uima.jcas.tcas.Annotation;
diff --git
a/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java
b/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java
index 7367fe8..137cd8c 100644
---
a/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java
+++
b/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java
@@ -32,7 +32,6 @@ import org.apache.ctakes.assertion.eval.AssertionEvaluation;
import
org.apache.ctakes.assertion.eval.AssertionEvaluation.ReferenceAnnotationsSystemAssertionClearer;
import
org.apache.ctakes.assertion.eval.AssertionEvaluation.ReferenceIdentifiedAnnotationsSystemToGoldCopier;
import org.apache.ctakes.core.cc.FileTreeXmiWriter;
-import org.apache.ctakes.core.cc.XmiWriterCasConsumerCtakes;
import org.apache.ctakes.core.config.ConfigParameterConstants;
import org.apache.log4j.Logger;
import org.apache.uima.analysis_engine.AnalysisEngineDescription;
diff --git
a/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/DictionaryLookupAnnotator.java
b/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/DictionaryLookupAnnotator.java
index e7b9375..3d5e04b 100644
---
a/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/DictionaryLookupAnnotator.java
+++
b/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/DictionaryLookupAnnotator.java
@@ -50,6 +50,9 @@ import
org.apache.uima.resource.ResourceInitializationException;
* UIMA annotator that identified entities based on lookup.
*
* @author Mayo Clinic
+ *
+ * @deprecated Use the dictionary-lookup-fast module.
+ * It is much faster and the same or better accuracy according to tests on
multiple annotated corpora.
*/
@PipeBitInfo(
name = "Dictionary Lookup (Old)",
