sameeraroshan commented on issue #13503:
URL: 
https://github.com/apache/incubator-echarts/issues/13503#issuecomment-723481655


   **Versions**
   
   - 5.0.0-beta.2 
   - 4.9.0 
   
   Other flavor of this issue can be reproduced as follows.
   
    Programmatically changing the `collapsed=true` -> `collapsed=false` on 
'Graph Handler Events' node and redraw graph using `setOption(options,true) ` 
   
   
![Capture-before](https://user-images.githubusercontent.com/4530891/98448916-9626e400-2155-11eb-93ba-c1366120896a.PNG)
   
   hidden nodes tree stays in the canvas
   
   
![Capture-after](https://user-images.githubusercontent.com/4530891/98448912-93c48a00-2155-11eb-933b-138df8250375.PNG)
   
   


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