http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java deleted file mode 100644 index 43b87f1..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabActivityConfigurationAction.java +++ /dev/null @@ -1,68 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -package net.sf.taverna.t2.activities.soaplab.actions; - -import java.awt.Frame; -import java.awt.event.ActionEvent; - -import javax.swing.Action; - -import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry; -import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager; -import net.sf.taverna.t2.workbench.edits.EditManager; -import net.sf.taverna.t2.workbench.file.FileManager; -import net.sf.taverna.t2.workbench.ui.actions.activity.ActivityConfigurationAction; -import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ActivityConfigurationDialog; -import uk.org.taverna.scufl2.api.activity.Activity; - -public class SoaplabActivityConfigurationAction extends ActivityConfigurationAction { - - private static final long serialVersionUID = 5076721332542691094L; - private final Frame owner; - public static final String CONFIGURE_SOAPLAB_ACTIVITY = "Configure Soaplab"; - private final EditManager editManager; - private final FileManager fileManager; - - public SoaplabActivityConfigurationAction(Activity activity, Frame owner, - EditManager editManager, FileManager fileManager, - ActivityIconManager activityIconManager, ServiceDescriptionRegistry serviceDescriptionRegistry) { - super(activity, activityIconManager, serviceDescriptionRegistry); - this.editManager = editManager; - this.fileManager = fileManager; - putValue(Action.NAME, CONFIGURE_SOAPLAB_ACTIVITY); - this.owner = owner; - } - - public void actionPerformed(ActionEvent action) { - ActivityConfigurationDialog currentDialog = ActivityConfigurationAction.getDialog(getActivity()); - if (currentDialog != null) { - currentDialog.toFront(); - return; - } - - final SoaplabConfigurationPanel panel = new SoaplabConfigurationPanel(getActivity()); - final ActivityConfigurationDialog dialog = new ActivityConfigurationDialog( - getActivity(), panel, editManager); - - ActivityConfigurationAction.setDialog(getActivity(), dialog, fileManager); - } - -}
http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java deleted file mode 100644 index 9b4b0c8..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/actions/SoaplabConfigurationPanel.java +++ /dev/null @@ -1,183 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -package net.sf.taverna.t2.activities.soaplab.actions; - -import java.awt.BorderLayout; -import java.awt.event.ActionListener; -import java.awt.event.ItemEvent; -import java.awt.event.ItemListener; - -import javax.swing.Box; -import javax.swing.BoxLayout; -import javax.swing.JCheckBox; -import javax.swing.JOptionPane; -import javax.swing.JPanel; -import javax.swing.JTextField; -import javax.swing.border.TitledBorder; - -import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ActivityConfigurationPanel; -import uk.org.taverna.scufl2.api.activity.Activity; - -@SuppressWarnings("serial") -public class SoaplabConfigurationPanel extends ActivityConfigurationPanel { - -// ActionListener closeClicked; -// ActionListener applyClicked; - - private JTextField intervalMaxField; - private JTextField intervalField; - private JTextField backoffField; - private JCheckBox allowPolling; - - public SoaplabConfigurationPanel(Activity activity) { - super(activity); - initialise(); - } - - public boolean isAllowPolling() { - return allowPolling.isSelected(); - } - - public int getInterval() { - return Integer.parseInt(intervalField.getText()); - } - - public int getIntervalMax() { - return Integer.parseInt(intervalMaxField.getText()); - } - - public double getBackoff() { - return Double.parseDouble(backoffField.getText()); - } - - @Override - protected void initialise() { - super.initialise(); - removeAll(); - - setLayout(new BoxLayout(this, BoxLayout.Y_AXIS)); - - JPanel interval = new JPanel(); - interval.setLayout(new BorderLayout()); - interval.setBorder(new TitledBorder("Interval")); - - JPanel intervalMax = new JPanel(); - intervalMax.setLayout(new BorderLayout()); - intervalMax.setBorder(new TitledBorder("Max interval")); - - JPanel backoff = new JPanel(); - backoff.setLayout(new BorderLayout()); - backoff.setBorder(new TitledBorder("Backoff")); - - intervalField = new JTextField(getJson().get("pollingInterval").asText()); - intervalMaxField = new JTextField(getJson().get("pollingIntervalMax").asText()); - backoffField = new JTextField(getJson().get("pollingBackoff").asText()); - - interval.add(intervalField, BorderLayout.CENTER); - intervalMax.add(intervalMaxField); - backoff.add(backoffField); - - allowPolling = new JCheckBox("Polling?", getJson().get("pollingInterval").intValue() != 0); - allowPolling.addItemListener(new ItemListener() { - public void itemStateChanged(ItemEvent e) { - updateEnableForPollingFlag(); - } - }); - - updateEnableForPollingFlag(); - JPanel allowPollingPanel = new JPanel(); - allowPollingPanel.setLayout(new BorderLayout()); - allowPollingPanel.add(allowPolling, BorderLayout.WEST); - add(allowPollingPanel); - add(interval); - add(intervalMax); - add(backoff); - add(Box.createGlue()); - validate(); - } - - @Override - public void noteConfiguration() { - if (validateValues()) { - int interval = 0; - int intervalMax = 0; - double backoff = 1.1; - - if (isAllowPolling()) { - interval = getInterval(); - intervalMax = getIntervalMax(); - backoff = getBackoff(); - } - - getJson().put("pollingBackoff", backoff); - getJson().put("pollingInterval", interval); - getJson().put("pollingIntervalMax", intervalMax); - } - } - - @Override - public boolean checkValues() { - // TODO Not yet implemented - return true; - } - - private void updateEnableForPollingFlag() { - boolean enabled = allowPolling.isSelected(); - intervalField.setEnabled(enabled); - intervalMaxField.setEnabled(enabled); - backoffField.setEnabled(enabled); - } - - public boolean validateValues() { - if (allowPolling.isSelected()) { - try { - new Integer(intervalField.getText()); - } catch (Exception e) { - JOptionPane.showMessageDialog(null, "The interval field must be a valid integer", - "Invalid value", JOptionPane.ERROR_MESSAGE); - return false; - - } - - try { - new Integer(intervalMaxField.getText()); - } catch (Exception e) { - JOptionPane.showMessageDialog(null, - "The maximum interval field must be a valid integer", "Invalid value", - JOptionPane.ERROR_MESSAGE); - return false; - - } - - try { - new Double(backoffField.getText()); - } catch (Exception e) { - JOptionPane.showMessageDialog(null, "The backoff field must be a valid float", - "Invalid value", JOptionPane.ERROR_MESSAGE); - return false; - - } - } - - return true; - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java deleted file mode 100644 index f182ecb..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/menu/ConfigureSoaplabActivityMenuAction.java +++ /dev/null @@ -1,54 +0,0 @@ -package net.sf.taverna.t2.activities.soaplab.menu; - -import javax.swing.Action; - -import net.sf.taverna.t2.activities.soaplab.actions.SoaplabActivityConfigurationAction; -import net.sf.taverna.t2.activities.soaplab.servicedescriptions.SoaplabServiceDescription; -import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry; -import net.sf.taverna.t2.ui.menu.ContextualMenuComponent; -import net.sf.taverna.t2.ui.menu.MenuComponent; -import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager; -import net.sf.taverna.t2.workbench.activitytools.AbstractConfigureActivityMenuAction; -import net.sf.taverna.t2.workbench.edits.EditManager; -import net.sf.taverna.t2.workbench.file.FileManager; - -public class ConfigureSoaplabActivityMenuAction extends AbstractConfigureActivityMenuAction - implements MenuComponent, ContextualMenuComponent { - - private EditManager editManager; - private FileManager fileManager; - private ActivityIconManager activityIconManager; - private ServiceDescriptionRegistry serviceDescriptionRegistry; - - public ConfigureSoaplabActivityMenuAction() { - super(SoaplabServiceDescription.ACTIVITY_TYPE); - } - - @Override - protected Action createAction() { - SoaplabActivityConfigurationAction configAction = new SoaplabActivityConfigurationAction( - findActivity(), getParentFrame(), editManager, fileManager, activityIconManager, - serviceDescriptionRegistry); - configAction.putValue(Action.NAME, - SoaplabActivityConfigurationAction.CONFIGURE_SOAPLAB_ACTIVITY); - addMenuDots(configAction); - return configAction; - } - - public void setEditManager(EditManager editManager) { - this.editManager = editManager; - } - - public void setFileManager(FileManager fileManager) { - this.fileManager = fileManager; - } - - public void setActivityIconManager(ActivityIconManager activityIconManager) { - this.activityIconManager = activityIconManager; - } - - public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) { - this.serviceDescriptionRegistry = serviceDescriptionRegistry; - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java deleted file mode 100644 index 594a7a2..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/MissingSoaplabException.java +++ /dev/null @@ -1,63 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -/* - * Copyright (C) 2003 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. Authorship - * of the modifications may be determined from the ChangeLog placed at - * the end of this file. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - * USA. - * - **************************************************************** - * Source code information - * ----------------------- - * Filename $RCSfile: MissingSoaplabException.java,v $ - * Revision $Revision: 1.3 $ - * Release status $State: Exp $ - * Last modified on $Date: 2008/11/19 17:33:04 $ - * by $Author: anenadic $ - * Created on 4 Sep 2006 - *****************************************************************/ -package net.sf.taverna.t2.activities.soaplab.servicedescriptions; - -@SuppressWarnings("serial") -public class MissingSoaplabException extends Exception { - - public MissingSoaplabException(String msg) { - super(msg); - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java deleted file mode 100644 index f9d273b..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabActivityIcon.java +++ /dev/null @@ -1,60 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -package net.sf.taverna.t2.activities.soaplab.servicedescriptions; - -import java.net.URI; - -import javax.swing.Icon; -import javax.swing.ImageIcon; - -import net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI; - -/** - * - * @author Alex Nenadic - * - */ -public class SoaplabActivityIcon implements ActivityIconSPI{ - - private static Icon icon; - - public int canProvideIconScore(URI activityType) { - if (SoaplabServiceDescription.ACTIVITY_TYPE.equals(activityType)) - return DEFAULT_ICON + 1; - else - return NO_ICON; - } - - public Icon getIcon(URI activityType) { - return getSoaplabIcon(); - } - - public static Icon getSoaplabIcon() { - if (icon == null) { - icon = new ImageIcon(SoaplabActivityIcon.class - .getResource("/soaplab.png")); - } - return icon; - } - -} - - http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java deleted file mode 100644 index 47f994c..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabCategory.java +++ /dev/null @@ -1,80 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -/* - * Copyright (C) 2003 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. Authorship - * of the modifications may be determined from the ChangeLog placed at - * the end of this file. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - * USA. - * - **************************************************************** - * Source code information - * ----------------------- - * Filename $RCSfile: SoaplabCategory.java,v $ - * Revision $Revision: 1.2 $ - * Release status $State: Exp $ - * Last modified on $Date: 2008/09/04 13:40:38 $ - * by $Author: sowen70 $ - * Created on 4 Sep 2006 - *****************************************************************/ -package net.sf.taverna.t2.activities.soaplab.servicedescriptions; - -import java.util.ArrayList; -import java.util.List; - -public class SoaplabCategory { - - private String category; - private List<String> services = new ArrayList<String>(); - - public SoaplabCategory(String category) { - this.category=category; - } - - public boolean addService(String service) { - return services.add(service); - } - - public String getCategory() { - return category; - } - - public List<String> getServices() { - return services; - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java deleted file mode 100644 index fe428ec..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabScavengerAgent.java +++ /dev/null @@ -1,144 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -/* - * Copyright (C) 2003 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. Authorship - * of the modifications may be determined from the ChangeLog placed at - * the end of this file. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - * USA. - * - **************************************************************** - * Source code information - * ----------------------- - * Filename $RCSfile: SoaplabScavengerAgent.java,v $ - * Revision $Revision: 1.2 $ - * Release status $State: Exp $ - * Last modified on $Date: 2008/09/04 13:40:37 $ - * by $Author: sowen70 $ - * Created on 4 Sep 2006 - *****************************************************************/ -package net.sf.taverna.t2.activities.soaplab.servicedescriptions; - -import java.rmi.RemoteException; -import java.util.ArrayList; -import java.util.List; - -import javax.xml.rpc.ServiceException; - -import org.apache.axis.client.Call; -import org.apache.axis.client.Service; -import org.apache.log4j.Logger; - -/** - * An agent to query Soaplab server to determine the available categories and services. - * @author sowen - * - */ - -public class SoaplabScavengerAgent { - - private static Logger logger = Logger.getLogger(SoaplabScavengerAgent.class); - - /** - * Returns a list of soaplab categories, containing a list of their services. - * Throws MissingSoaplabException if an installation cannot be found. - */ - public static List<SoaplabCategory> load(String base) throws MissingSoaplabException{ - List<SoaplabCategory> categories=new ArrayList<SoaplabCategory>(); - - // Get the categories for this installation - boolean foundAnInstallation = loadCategories(base + "AnalysisFactory",categories); - - // Yes, bitwise OR is on purpose, to make sure the second - // loadCategories() is always run. Do NOT replace with - // foundInstallation = foundInstallation || getCategories(..) - foundAnInstallation |= loadCategories(base + "GowlabFactory",categories); - if (!foundAnInstallation) { - // Neither Soaplab nor Gowlab were found, probably a fault - throw new MissingSoaplabException("Unable to locate a soaplab installation at \n" + base); - } - - return categories; - - } - - - private static boolean loadCategories(String categoryBase, List<SoaplabCategory>cats) { - boolean foundSome = false; - String[] categories; - try { - categories = (String[]) callWebService(categoryBase, "getAvailableCategories", new Object[0]); - } catch (Exception e) { - logger.debug("Missing category: "+categoryBase, e); - return false; - } - // Iterate over all the categories, creating new child nodes - for (int i = 0; i < categories.length; i++) { - String[] services; - try { - services = (String[]) callWebService(categoryBase, "getAvailableAnalysesInCategory", new Object[] {categories[i]}); - } catch (Exception e) { - logger.info("Skipping category " + categories[i], e); - continue; - } - if (services.length == 0) { - // Avoid creating empty treenodes - continue; - } - - SoaplabCategory category=new SoaplabCategory(categories[i]); - cats.add(category); - - foundSome = true; - // Iterate over the services - for (int j = 0; j < services.length; j++) { - category.addService(services[j]); - } - } - return foundSome; - } - - public static Object callWebService(String target, String operation, - Object[] parameters) throws ServiceException, RemoteException { - Service service = new Service(); - Call call = (Call) service.createCall(); - call.setTargetEndpointAddress(target); - // No need to do new Qname(operation) with unspecified namespaces - call.setOperationName(operation); - return call.invoke(parameters); - } -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java deleted file mode 100644 index 99a25b3..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceDescription.java +++ /dev/null @@ -1,131 +0,0 @@ -package net.sf.taverna.t2.activities.soaplab.servicedescriptions; - -import java.net.URI; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.List; - -import javax.swing.Icon; - -import net.sf.taverna.t2.servicedescriptions.ServiceDescription; -import uk.org.taverna.scufl2.api.configurations.Configuration; - -import com.fasterxml.jackson.databind.node.ObjectNode; - -public class SoaplabServiceDescription extends ServiceDescription { - - public static final URI ACTIVITY_TYPE = URI.create("http://ns.taverna.org.uk/2010/activity/soaplab";); - - private final static String SOAPLAB = "Soaplab @ "; - - private String category; - private String operation; - private URI endpoint; - private List<String> types; - - private String name; - - public List<String> getTypes() { - return types; - } - - /** - * @return the category - */ - public String getCategory() { - return category; - } - - /** - * @param category - * the category to set - */ - public void setCategory(String category) { - this.category = category; - } - - /** - * @return the operation - */ - public String getOperation() { - return operation; - } - - /** - * @param operation - * the operation to set - */ - public void setOperation(final String operation) { - this.operation = operation; - - String name = operation; - int finalColon = operation.lastIndexOf(":"); - if (finalColon != -1) { - name = operation.substring(finalColon + 1); - } - int finalDot = operation.lastIndexOf("."); - if (finalDot != -1) { - name = operation.substring(finalDot + 1); - } - setName(name); - } - - public void setName(String name) { - this.name = name; - } - - - @Override - public URI getActivityType() { - return ACTIVITY_TYPE; - } - - @Override - public Configuration getActivityConfiguration() { - Configuration configuration = new Configuration(); - configuration.setType(ACTIVITY_TYPE.resolve("#Config")); - ((ObjectNode) configuration.getJson()).put("endpoint", getEndpoint().toASCIIString() + getOperation()); - ((ObjectNode) configuration.getJson()).put("pollingInterval", 0); - ((ObjectNode) configuration.getJson()).put("pollingBackoff", 1.0); - ((ObjectNode) configuration.getJson()).put("pollingIntervalMax", 0); - return configuration; - } - - @Override - public Icon getIcon() { - return SoaplabActivityIcon.getSoaplabIcon(); - } - - @Override - public String getName() { - return name; - } - - @Override - public List<String> getPath() { - List<String> path = new ArrayList<String>(); - path.add(SOAPLAB + getEndpoint()); - path.add(getCategory()); - // Don't use getTypes() - as we end up - // with double entries.. - return path; - } - - public void setTypes(List<String> types) { - this.types = types; - } - - public void setEndpoint(URI endpoint) { - this.endpoint = endpoint; - } - - public URI getEndpoint() { - return endpoint; - } - - @Override - protected List<Object> getIdentifyingData() { - return Arrays.<Object>asList(getEndpoint(), getOperation()); - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java deleted file mode 100644 index 54080c9..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProvider.java +++ /dev/null @@ -1,183 +0,0 @@ -package net.sf.taverna.t2.activities.soaplab.servicedescriptions; - -import java.net.URI; -import java.rmi.RemoteException; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Date; -import java.util.List; -import java.util.Map; - -import javax.swing.Icon; -import javax.xml.rpc.ServiceException; - -import net.sf.taverna.t2.activities.soaplab.Soap; -import net.sf.taverna.t2.servicedescriptions.AbstractConfigurableServiceProvider; -import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry; - -import org.apache.log4j.Logger; - -public class SoaplabServiceProvider extends - AbstractConfigurableServiceProvider<SoaplabServiceProviderConfig> { - - // To avoid hammering the soaplab service - private static final int DELAY_MS = 100; - private static final int DESCRIPTION_UPDATE_INTERVAL_MS = 2000; - - private static Logger logger = Logger - .getLogger(SoaplabServiceProvider.class); - - private static final String SOAPLAB_SERVICE = "Soaplab service"; - private static final boolean FIND_DETAILS = false; - - private static final URI providerId = URI - .create("http://taverna.sf.net/2010/service-provider/soaplab";); - - private ServiceDescriptionRegistry serviceDescriptionRegistry; - - public SoaplabServiceProvider() { - super(new SoaplabServiceProviderConfig( - "http://somehost/soaplab/services/";)); - } - - public void findServiceDescriptionsAsync( - FindServiceDescriptionsCallBack callBack) { - List<SoaplabServiceDescription> descriptions = findSoaplabServices(callBack); - if (descriptions == null) { - return; - } - callBack.partialResults(descriptions); - - if (FIND_DETAILS) { - if (findSoaplabDetails(descriptions, callBack)) { - callBack.finished(); - } - } else { - callBack.finished(); - } - } - - public List<SoaplabServiceProviderConfig> getDefaultConfigurations() { - - List<SoaplabServiceProviderConfig> defaults = new ArrayList<SoaplabServiceProviderConfig>(); - - // If defaults have failed to load from a configuration file then load them here. - if (!serviceDescriptionRegistry.isDefaultSystemConfigurableProvidersLoaded()){ - defaults.add(new SoaplabServiceProviderConfig( - "http://wsembnet.vital-it.ch/soaplab2-axis/services/";)); - } // else return an empty list - - return defaults; - } - - public Icon getIcon() { - return SoaplabActivityIcon.getSoaplabIcon(); - } - - public String getName() { - return SOAPLAB_SERVICE; - } - - @SuppressWarnings("unchecked") - protected boolean findSoaplabDetails( - List<SoaplabServiceDescription> descriptions, - FindServiceDescriptionsCallBack callBack) { - Date lastUpdate = new Date(); - // We'll fetch more details and update the descriptions in the - // background - List<SoaplabServiceDescription> updatedDescriptions = new ArrayList<SoaplabServiceDescription>(); - for (SoaplabServiceDescription serviceDescription : descriptions) { - try { - Date now = new Date(); - if (now.getTime() - lastUpdate.getTime() > DESCRIPTION_UPDATE_INTERVAL_MS) { - if (!updatedDescriptions.isEmpty()) { - callBack.partialResults(updatedDescriptions); - updatedDescriptions = new ArrayList<SoaplabServiceDescription>(); - } - lastUpdate = now; - } - Thread.sleep(DELAY_MS); - URI soaplabEndpoint = serviceProviderConfig.getEndpoint(); - Map info = (Map) Soap.callWebService(soaplabEndpoint - .toASCIIString() - + "/" + serviceDescription.getOperation(), - "getAnalysisType"); // Get the description element from - // the map - String description = (String) info.get("description"); - if (description != null) { - serviceDescription.setDescription(description); - } - updatedDescriptions.add(serviceDescription); - String type = (String) info.get("type"); - if (type != null) { - serviceDescription.setTypes(Arrays.asList(type.split(","))); - } - } catch (ClassCastException e) { - logger.warn("Can't read descriptions for soaplab service " - + serviceDescription, e); - callBack.warning("Can't read descriptions for soaplab service " - + serviceDescription.getOperation()); - } catch (ServiceException e) { - logger.warn("Can't read descriptions for soaplab service " - + serviceDescription, e); - callBack.warning("Can't read descriptions for soaplab service " - + serviceDescription.getOperation()); - } catch (RemoteException e) { - logger.warn("Can't read descriptions for soaplab service " - + serviceDescription, e); - callBack.warning("Can't read descriptions for soaplab service " - + serviceDescription.getOperation()); - } catch (InterruptedException ex) { - callBack.fail("Thread was interrupted", ex); - return false; - } - } - if (!updatedDescriptions.isEmpty()) { - callBack.partialResults(updatedDescriptions); - } - return true; - } - - protected List<SoaplabServiceDescription> findSoaplabServices( - FindServiceDescriptionsCallBack callBack) { - List<SoaplabServiceDescription> descriptions = new ArrayList<SoaplabServiceDescription>(); - URI soaplabEndpoint = serviceProviderConfig.getEndpoint(); - callBack.status("Connecting to Soaplab:" + soaplabEndpoint); - List<SoaplabCategory> categories; - try { - categories = SoaplabScavengerAgent.load(soaplabEndpoint - .toASCIIString()); - } catch (MissingSoaplabException ex) { - String message = "There was an error with the soaplab: " - + soaplabEndpoint; - callBack.fail(message, ex); - return null; - } - for (SoaplabCategory cat : categories) { - for (String service : cat.getServices()) { - SoaplabServiceDescription item = new SoaplabServiceDescription(); - item.setCategory(cat.getCategory()); - item.setOperation(service); - item.setEndpoint(soaplabEndpoint); - descriptions.add(item); - } - } - return descriptions; - } - - @Override - protected List<? extends Object> getIdentifyingData() { - List<String> result; - result = Arrays.asList(getConfiguration().getEndpoint().toString()); - return result; - } - - public String getId() { - return providerId.toString(); - } - - public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) { - this.serviceDescriptionRegistry = serviceDescriptionRegistry; - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java deleted file mode 100644 index d1e86da..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/servicedescriptions/SoaplabServiceProviderConfig.java +++ /dev/null @@ -1,38 +0,0 @@ -package net.sf.taverna.t2.activities.soaplab.servicedescriptions; - -import java.net.URI; - -import net.sf.taverna.t2.lang.beans.PropertyAnnotated; -import net.sf.taverna.t2.lang.beans.PropertyAnnotation; - -public class SoaplabServiceProviderConfig extends PropertyAnnotated { - - private URI endpoint; - - public SoaplabServiceProviderConfig() { - } - - public SoaplabServiceProviderConfig(String endpointURI) { - this.setEndpoint(URI.create(endpointURI.trim())); - } - - @PropertyAnnotation(displayName = "Soaplab location", preferred = true) - public URI getEndpoint() { - return endpoint; - } - - public String toString() { - return getEndpoint().toString(); - } - - public void setEndpoint(URI endpoint) { - String uriString = endpoint.toString(); - if (!uriString.endsWith("/")) { - uriString = uriString + "/"; - this.endpoint = URI.create(uriString); - } else { - this.endpoint = endpoint; - } - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java deleted file mode 100644 index de51f23..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityContextualView.java +++ /dev/null @@ -1,156 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -package net.sf.taverna.t2.activities.soaplab.views; - -import java.awt.Frame; -import java.io.ByteArrayInputStream; -import java.io.ByteArrayOutputStream; -import java.net.URL; - -import javax.swing.Action; -import javax.xml.namespace.QName; -import javax.xml.transform.Templates; -import javax.xml.transform.Transformer; -import javax.xml.transform.TransformerFactory; -import javax.xml.transform.stream.StreamResult; -import javax.xml.transform.stream.StreamSource; - -import net.sf.taverna.t2.activities.soaplab.actions.SoaplabActivityConfigurationAction; -import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry; -import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager; -import net.sf.taverna.t2.workbench.configuration.colour.ColourManager; -import net.sf.taverna.t2.workbench.edits.EditManager; -import net.sf.taverna.t2.workbench.file.FileManager; -import net.sf.taverna.t2.workbench.ui.actions.activity.HTMLBasedActivityContextualView; - -import org.apache.axis.client.Call; -import org.apache.axis.client.Service; -import org.apache.log4j.Logger; - -import uk.org.taverna.scufl2.api.activity.Activity; -import uk.org.taverna.scufl2.api.configurations.Configuration; - -import com.fasterxml.jackson.databind.JsonNode; - -public class SoaplabActivityContextualView extends HTMLBasedActivityContextualView { - - private static Logger logger = Logger.getLogger(SoaplabActivityContextualView.class); - - private static final long serialVersionUID = -6470801873448104509L; - - private final EditManager editManager; - - private final FileManager fileManager; - - private final ActivityIconManager activityIconManager; - - private final ServiceDescriptionRegistry serviceDescriptionRegistry; - - public SoaplabActivityContextualView(Activity activity, EditManager editManager, - FileManager fileManager, ActivityIconManager activityIconManager, - ColourManager colourManager, ServiceDescriptionRegistry serviceDescriptionRegistry) { - super(activity, colourManager); - this.editManager = editManager; - this.fileManager = fileManager; - this.activityIconManager = activityIconManager; - this.serviceDescriptionRegistry = serviceDescriptionRegistry; - } - - @Override - public String getViewTitle() { - return "Soaplab service"; - } - - @Override - protected String getRawTableRowsHtml() { - Configuration configuration = getConfigBean(); - JsonNode json = configuration.getJson(); - String html = "<tr><td>Endpoint</td><td>" + json.get("endpoint").textValue() + "</td></tr>"; - html += "<tr><td>Polling interval</td><td>" + json.get("pollingInterval").asText() - + "</td></tr>"; - html += "<tr><td>Polling backoff</td><td>" + json.get("pollingBackoff").asText() - + "</td></tr>"; - html += "<tr><td>Polling interval max</td><td>" + json.get("pollingIntervalMax").asText() - + "</td></tr>"; - // html += "<tr><td>SOAPLAB Metadata</td><td>" + getMetadata() - // + "</td></tr>"; - return html; - } - - @Override - public Action getConfigureAction(Frame owner) { - return new SoaplabActivityConfigurationAction(getActivity(), owner, editManager, - fileManager, activityIconManager, serviceDescriptionRegistry); - } - - private String getMetadata() { - try { - Configuration configuration = getConfigBean(); - JsonNode json = configuration.getJson(); - String endpoint = json.get("endpoint").textValue(); - Call call = (Call) new Service().createCall(); - call.setTimeout(new Integer(0)); - call.setTargetEndpointAddress(endpoint); - call.setOperationName(new QName("describe")); - String metadata = (String) call.invoke(new Object[0]); - logger.info(metadata); - // Old impl, returns a tree of the XML - // ColXMLTree tree = new ColXMLTree(metadata); - URL sheetURL = SoaplabActivityContextualView.class - .getResource("/analysis_metadata_2_html.xsl"); - TransformerFactory transformerFactory = TransformerFactory.newInstance(); - logger.info(sheetURL.toString()); - Templates stylesheet = transformerFactory.newTemplates(new StreamSource(sheetURL - .openStream())); - Transformer transformer = stylesheet.newTransformer(); - StreamSource inputStream = new StreamSource(new ByteArrayInputStream( - metadata.getBytes())); - ByteArrayOutputStream transformedStream = new ByteArrayOutputStream(); - StreamResult result = new StreamResult(transformedStream); - transformer.transform(inputStream, result); - transformedStream.flush(); - transformedStream.close(); - // String summaryText = "<html><head>" - // + WorkflowSummaryAsHTML.STYLE_NOBG + "</head>" - // + transformedStream.toString() + "</html>"; - // JEditorPane metadataPane = new ColJEditorPane("text/html", - // summaryText); - // metadataPane.setText(transformedStream.toString()); - // // logger.info(transformedStream.toString()); - // JScrollPane jsp = new JScrollPane(metadataPane, - // JScrollPane.VERTICAL_SCROLLBAR_AS_NEEDED, - // JScrollPane.HORIZONTAL_SCROLLBAR_NEVER); - // jsp.setPreferredSize(new Dimension(0, 0)); - // jsp.getVerticalScrollBar().setValue(0); - return transformedStream.toString(); - } catch (Exception ex) { - return "<font color=\"red\">Error</font><p>An exception occured while trying to fetch Soaplab metadata from the server. The error was :<pre>" - + ex.getMessage() + "</pre>"; - - } - } - - @Override - public int getPreferredPosition() { - return 100; - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java b/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java deleted file mode 100644 index 23e94d8..0000000 --- a/taverna-soaplab-activity-ui/src/main/java/net/sf/taverna/t2/activities/soaplab/views/SoaplabActivityViewFactory.java +++ /dev/null @@ -1,73 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -package net.sf.taverna.t2.activities.soaplab.views; - -import java.util.Arrays; -import java.util.List; - -import net.sf.taverna.t2.activities.soaplab.servicedescriptions.SoaplabServiceDescription; -import net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry; -import net.sf.taverna.t2.workbench.activityicons.ActivityIconManager; -import net.sf.taverna.t2.workbench.configuration.colour.ColourManager; -import net.sf.taverna.t2.workbench.edits.EditManager; -import net.sf.taverna.t2.workbench.file.FileManager; -import net.sf.taverna.t2.workbench.ui.views.contextualviews.ContextualView; -import net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory; -import uk.org.taverna.scufl2.api.activity.Activity; - -public class SoaplabActivityViewFactory implements ContextualViewFactory<Activity> { - - private EditManager editManager; - private FileManager fileManager; - private ActivityIconManager activityIconManager; - private ColourManager colourManager; - private ServiceDescriptionRegistry serviceDescriptionRegistry; - - public boolean canHandle(Object object) { - return object instanceof Activity && ((Activity) object).getType().equals(SoaplabServiceDescription.ACTIVITY_TYPE); - } - - public List<ContextualView> getViews(Activity activity) { - return Arrays.asList(new ContextualView[] { new SoaplabActivityContextualView(activity, - editManager, fileManager, activityIconManager, colourManager, serviceDescriptionRegistry) }); - } - - public void setEditManager(EditManager editManager) { - this.editManager = editManager; - } - - public void setFileManager(FileManager fileManager) { - this.fileManager = fileManager; - } - - public void setActivityIconManager(ActivityIconManager activityIconManager) { - this.activityIconManager = activityIconManager; - } - - public void setColourManager(ColourManager colourManager) { - this.colourManager = colourManager; - } - - public void setServiceDescriptionRegistry(ServiceDescriptionRegistry serviceDescriptionRegistry) { - this.serviceDescriptionRegistry = serviceDescriptionRegistry; - } - -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider b/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider deleted file mode 100644 index fb73ade..0000000 --- a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider +++ /dev/null @@ -1 +0,0 @@ -net.sf.taverna.t2.activities.soaplab.servicedescriptions.SoaplabServiceProvider http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent b/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent deleted file mode 100644 index 1eeb850..0000000 --- a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.ui.menu.MenuComponent +++ /dev/null @@ -1 +0,0 @@ -net.sf.taverna.t2.activities.soaplab.menu.ConfigureSoaplabActivityMenuAction http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI b/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI deleted file mode 100644 index 0bb5227..0000000 --- a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI +++ /dev/null @@ -1 +0,0 @@ -net.sf.taverna.t2.activities.soaplab.servicedescriptions.SoaplabActivityIcon \ No newline at end of file http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory b/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory deleted file mode 100644 index ea7da0b..0000000 --- a/taverna-soaplab-activity-ui/src/main/resources/META-INF/services/net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory +++ /dev/null @@ -1 +0,0 @@ -net.sf.taverna.t2.activities.soaplab.views.SoaplabActivityViewFactory \ No newline at end of file http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context-osgi.xml ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context-osgi.xml b/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context-osgi.xml deleted file mode 100644 index f7e486e..0000000 --- a/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context-osgi.xml +++ /dev/null @@ -1,28 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<beans:beans xmlns="http://www.springframework.org/schema/osgi"; xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; - xmlns:beans="http://www.springframework.org/schema/beans"; - xsi:schemaLocation="http://www.springframework.org/schema/beans - http://www.springframework.org/schema/beans/spring-beans.xsd - http://www.springframework.org/schema/osgi - http://www.springframework.org/schema/osgi/spring-osgi.xsd";> - - <service ref="SoaplabActivityIcon" interface="net.sf.taverna.t2.workbench.activityicons.ActivityIconSPI" /> - - <service ref="SoaplabServiceProvider"> - <interfaces> - <beans:value>net.sf.taverna.t2.servicedescriptions.ServiceDescriptionProvider</beans:value> - <beans:value>net.sf.taverna.t2.servicedescriptions.ConfigurableServiceProvider</beans:value> - </interfaces> - </service> - - <service ref="ConfigureSoaplabActivityMenuAction" auto-export="interfaces" /> - - <service ref="SoaplabActivityViewFactory" interface="net.sf.taverna.t2.workbench.ui.views.contextualviews.activity.ContextualViewFactory" /> - - <reference id="editManager" interface="net.sf.taverna.t2.workbench.edits.EditManager" /> - <reference id="fileManager" interface="net.sf.taverna.t2.workbench.file.FileManager" /> - <reference id="activityIconManager" interface="net.sf.taverna.t2.workbench.activityicons.ActivityIconManager" /> - <reference id="colourManager" interface="net.sf.taverna.t2.workbench.configuration.colour.ColourManager" /> - <reference id="serviceDescriptionRegistry" interface="net.sf.taverna.t2.servicedescriptions.ServiceDescriptionRegistry" /> - -</beans:beans> http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context.xml ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context.xml b/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context.xml deleted file mode 100644 index 7f99ff2..0000000 --- a/taverna-soaplab-activity-ui/src/main/resources/META-INF/spring/soaplab-activity-ui-context.xml +++ /dev/null @@ -1,27 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<beans xmlns="http://www.springframework.org/schema/beans"; xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; - xsi:schemaLocation="http://www.springframework.org/schema/beans - http://www.springframework.org/schema/beans/spring-beans.xsd";> - - <bean id="SoaplabActivityIcon" class="net.sf.taverna.t2.activities.soaplab.servicedescriptions.SoaplabActivityIcon" /> - - <bean id="SoaplabServiceProvider" class="net.sf.taverna.t2.activities.soaplab.servicedescriptions.SoaplabServiceProvider"> - <property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" /> - </bean> - - <bean id="ConfigureSoaplabActivityMenuAction" class="net.sf.taverna.t2.activities.soaplab.menu.ConfigureSoaplabActivityMenuAction"> - <property name="editManager" ref="editManager" /> - <property name="fileManager" ref="fileManager" /> - <property name="activityIconManager" ref="activityIconManager" /> - <property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" /> - </bean> - - <bean id="SoaplabActivityViewFactory" class="net.sf.taverna.t2.activities.soaplab.views.SoaplabActivityViewFactory" > - <property name="editManager" ref="editManager" /> - <property name="fileManager" ref="fileManager" /> - <property name="activityIconManager" ref="activityIconManager" /> - <property name="colourManager" ref="colourManager" /> - <property name="serviceDescriptionRegistry" ref="serviceDescriptionRegistry" /> - </bean> - -</beans> http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/analysis_metadata_2_html.xsl ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/analysis_metadata_2_html.xsl b/taverna-soaplab-activity-ui/src/main/resources/analysis_metadata_2_html.xsl deleted file mode 100644 index 5095e5c..0000000 --- a/taverna-soaplab-activity-ui/src/main/resources/analysis_metadata_2_html.xsl +++ /dev/null @@ -1,96 +0,0 @@ -<?xml version="1.0" encoding="utf-8"?> - -<!-- ===================================================================== --> -<!-- Converting analysis metadata returned by Soaplab Web Services to HTML --> -<!-- (http://www.ebi.ac.uk/soaplab/) --> -<!-- Author: Martin Senger (sen...@ebi.ac.uk) --> -<!-- ===================================================================== --> - -<!-- $Id: analysis_metadata_2_html.xsl,v 1.1 2008/07/14 15:27:42 iandunlop Exp $ --> - -<xsl:stylesheet xmlns:xsl="http://www.w3.org/1999/XSL/Transform"; - version="1.0"> - <xsl:output method="html"/> - - <!-- the main document body --> - <xsl:template match="/"> - <body> - <xsl:apply-templates/> - </body> - </xsl:template> - - <!-- analysis --> - <xsl:template match="/DsLSRAnalysis/analysis"> - - <!-- analysis name --> - <table border="0" cellpadding="2" cellspacing="3" width="98%" align="center"><tr><th bgcolor="#eeeedd"> - <font size="+1"><xsl:value-of select="@name"/></font> - </th></tr></table> - - <!-- analysis metadata --> - <table border="0" cellspacing="1" cellpadding="1" width="99%" align="center"><tr> - <td> - <table border="0" cellspacing="2"> - <xsl:apply-templates select="description" mode="as-row"/> - <xsl:apply-templates select="analysis_extension/app_info/@*[local-name != 'help_URL']" mode="as-row"/> - <xsl:apply-templates select="@*[local-name() != 'name']" mode="as-row"/> - <tr><td>Help URL</td><td><a href="{analysis_extension/app_info/@help_URL}"><xsl:value-of select="analysis_extension/app_info/@help_URL"/></a></td></tr> - </table> - </td></tr></table> - - <!-- inputs/outputs metadata --> - <table border="0" width="98%" cellpadding="2" cellspacing="1" align="center"> - <tr><td colspan="2" bgcolor="#eeeedd"> <b>Outputs</b> </td></tr> - <xsl:apply-templates select="output"/> - <tr><td colspan="2" bgcolor="#eeeedd"> <b>Inputs</b> </td></tr> - <xsl:apply-templates select="input"/> - </table> - - </xsl:template> - - <!-- metadata about one input or output --> - <xsl:template match="input|output"> - <xsl:variable name="param_name" select="@name"/> - <tr bgcolor="#eae9c2"> - <td valign="top"><b><xsl:value-of select="@name"/></b></td> - <td><table border="0" cellspacing="1" cellpadding="1" bgcolor="white" width="100%"> - <xsl:apply-templates select="@*[local-name() != 'name']" mode="as-row"/> - <xsl:apply-templates select="allowed" mode="as-row"/> - <xsl:apply-templates select="../analysis_extension/parameter/base[@name =$param_name]/*" mode="as-row"/> - <xsl:apply-templates select="../analysis_extension/parameter/base[concat(@name,'_url') =$param_name]/*" mode="as-row"/> - <xsl:apply-templates select="../analysis_extension/parameter/base[concat(@name,'_direct_data')=$param_name]/*" mode="as-row"/> - <xsl:apply-templates select="../analysis_extension/parameter/base[concat(@name,'_usa') =$param_name]/*" mode="as-row"/> - </table></td> - </tr> - </xsl:template> - - <!-- attributes and elements expressed as a (bold)name and value --> - <xsl:template match="@*[local-name() != 'help_URL']|description|default|prompt|help" mode="as-row"> - <tr> - <td valign="top" width="80"><em><xsl:value-of select="local-name()"/></em></td> - <td><xsl:value-of select="."/></td> - </tr> - </xsl:template> - - <!-- more-values elements --> - <xsl:template match="allowed" mode="as-row"> - - <xsl:if test="position() = 1"> - <xsl:text disable-output-escaping = "yes"><tr></xsl:text> - <td valign="top" width="80"><em><xsl:value-of select="local-name()"/></em></td> - <xsl:text disable-output-escaping = "yes"><td></xsl:text> - </xsl:if> - - <xsl:value-of select="."/> - <xsl:if test="position() != last()"> - <xsl:text>, </xsl:text> - </xsl:if> - - <xsl:if test="position() = last()"> - <xsl:text disable-output-escaping = "yes"></td></xsl:text> - <xsl:text disable-output-escaping = "yes"></tr></xsl:text> - </xsl:if> - - </xsl:template> - -</xsl:stylesheet> http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/main/resources/soaplab.png ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/main/resources/soaplab.png b/taverna-soaplab-activity-ui/src/main/resources/soaplab.png deleted file mode 100644 index b86d848..0000000 Binary files a/taverna-soaplab-activity-ui/src/main/resources/soaplab.png and /dev/null differ http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java b/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java deleted file mode 100644 index c4d683d..0000000 --- a/taverna-soaplab-activity-ui/src/test/java/net/sf/taverna/t2/activities/soaplab/views/TestSoaplabActivityContextualView.java +++ /dev/null @@ -1,61 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -package net.sf.taverna.t2.activities.soaplab.views; - -import static org.junit.Assert.assertNotNull; -import static org.junit.Assert.assertTrue; -import net.sf.taverna.t2.activities.soaplab.actions.SoaplabActivityConfigurationAction; -import net.sf.taverna.t2.workbench.ui.views.contextualviews.ContextualView; - -import org.junit.Before; -import org.junit.Ignore; -import org.junit.Test; - -import uk.org.taverna.scufl2.api.activity.Activity; - -public class TestSoaplabActivityContextualView { - - Activity a; - - @Before - public void setup() throws Exception { - a=new Activity(); - } - - @Test - @Ignore("Integration test") - public void testConfigureAction() throws Exception { - ContextualView view = new SoaplabActivityContextualView(a, null, null, null, null, null); - assertNotNull("the action should not be null",view.getConfigureAction(null)); - assertTrue("The action should be a SoaplabAcitivyConfigurationAction",view.getConfigureAction(null) instanceof SoaplabActivityConfigurationAction); - } - - private void run() throws Exception - { - setup(); - ContextualView view = new SoaplabActivityContextualView(a, null, null, null, null, null); - view.setVisible(true); - } - - public static void main(String[] args) throws Exception { - new TestSoaplabActivityContextualView().run(); - } -} http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity/pom.xml ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity/pom.xml b/taverna-soaplab-activity/pom.xml deleted file mode 100644 index 5459718..0000000 --- a/taverna-soaplab-activity/pom.xml +++ /dev/null @@ -1,80 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<project xmlns="http://maven.apache.org/POM/4.0.0"; xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd";> - <modelVersion>4.0.0</modelVersion> - <parent> - <groupId>net.sf.taverna</groupId> - <artifactId>taverna-parent</artifactId> - <version>3.0.1-SNAPSHOT</version> - </parent> - <groupId>net.sf.taverna.t2.activities</groupId> - <artifactId>soaplab-activity</artifactId> - <packaging>bundle</packaging> - <name>Taverna 2 Soaplab Activity</name> - <dependencies> - <dependency> - <groupId>net.sf.taverna.t2.core</groupId> - <artifactId>workflowmodel-api</artifactId> - <version>${t2.core.version}</version> - </dependency> - <dependency> - <groupId>net.sf.taverna.t2.core</groupId> - <artifactId>reference-api</artifactId> - <version>${t2.core.version}</version> - </dependency> - <dependency> - <groupId>org.apache.axis</groupId> - <artifactId>com.springsource.org.apache.axis</artifactId> - <version>${axis.version}</version> - </dependency> - <dependency> - <groupId>javax.xml.rpc</groupId> - <artifactId>com.springsource.javax.xml.rpc</artifactId> - <version>${xml.rpc.version}</version> - </dependency> - <dependency> - <groupId>org.apache.log4j</groupId> - <artifactId>com.springsource.org.apache.log4j</artifactId> - <version>${log4j.version}</version> - </dependency> - <dependency> - <groupId>junit</groupId> - <artifactId>junit</artifactId> - <version>${junit.version}</version> - <scope>test</scope> - </dependency> - <dependency> - <groupId>net.sf.taverna.t2.activities</groupId> - <artifactId>activity-test-utils</artifactId> - <version>${t2.activities.version}</version> - <scope>test</scope> - </dependency> - </dependencies> - <repositories> - <repository> - <releases /> - <snapshots> - <enabled>false</enabled> - </snapshots> - <id>mygrid-repository</id> - <name>myGrid Repository</name> - <url>http://www.mygrid.org.uk/maven/repository</url> - </repository> - <repository> - <releases> - <enabled>false</enabled> - </releases> - <snapshots /> - <id>mygrid-snapshot-repository</id> - <name>myGrid Snapshot Repository</name> - <url>http://www.mygrid.org.uk/maven/snapshot-repository</url> - </repository> - </repositories> - <scm> - <connection>scm:git:https://github.com/taverna/taverna-soaplab-activity.git</connection> - <developerConnection>scm:git:ssh://g...@github.com:taverna/taverna-soaplab-activity.git</developerConnection> - <url>https://github.com/taverna/taverna-soaplab-activity</url> - <tag>HEAD</tag> - </scm> - -</project> - http://git-wip-us.apache.org/repos/asf/incubator-taverna-plugin-bioinformatics/blob/e13e3b74/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java ---------------------------------------------------------------------- diff --git a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java b/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java deleted file mode 100644 index ba9cce6..0000000 --- a/taverna-soaplab-activity/src/main/java/net/sf/taverna/t2/activities/soaplab/Soap.java +++ /dev/null @@ -1,82 +0,0 @@ -/******************************************************************************* - * Copyright (C) 2007 The University of Manchester - * - * Modifications to the initial code base are copyright of their - * respective authors, or their employers as appropriate. - * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU Lesser General Public License - * as published by the Free Software Foundation; either version 2.1 of - * the License, or (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU - * Lesser General Public License for more details. - * - * You should have received a copy of the GNU Lesser General Public - * License along with this program; if not, write to the Free Software - * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 - ******************************************************************************/ -package net.sf.taverna.t2.activities.soaplab; - -import java.rmi.RemoteException; - -import javax.xml.rpc.ServiceException; - -import org.apache.axis.client.Call; -import org.apache.axis.client.Service; - -/** - * Convenience methods for simpler calling of SOAP services using the Axis - * client. - * - * Note that for complex scenarious you might want to construct the Call object - * yourself. - * - * @author Stian Soiland - * - */ -public class Soap { - /** - * Invoke the web service, passing no parameters, and return the result. - * - * @see callWebService(String target, String operation, Object[] parameters) - * - */ - public static Object callWebService(String target, String operation) - throws ServiceException, RemoteException { - return callWebService(target, operation, new Object[0]); - } - - /** - * Invoke the web service, passing a single String parameter, and return the result. - * - * @see callWebService(String target, String operation, Object[] parameters) - * - */ - public static Object callWebService(String target, String operation, - String parameter) throws ServiceException, RemoteException { - return callWebService(target, operation, new String[] { parameter }); - } - - /** - * Invoke the web service and return the result. - * - * @param target The full URL to the service, example "http://www.ebi.ac.uk/soaplab/services/AnalysisFactory"; - * @param operation The operation name, example "getAvailableCategories" - * @param parameters A (possibly empty) list of parameters - * @return The result returned from calling the webservice operation - * @throws ServiceException If web service facilities are not available - * @throws RemoteException If remote call failed - */ - public static Object callWebService(String target, String operation, - Object[] parameters) throws ServiceException, RemoteException { - Service service = new Service(); - Call call = (Call) service.createCall(); - call.setTargetEndpointAddress(target); - // No need to do new Qname(operation) with unspecified namespaces - call.setOperationName(operation); - return call.invoke(parameters); - } -}
