Hi all I've attempting to install COOT 0.5 I downloaded the stable tarball coot-0.5-binary-Linux-i386-fedora-8.tar.gz
when I run the coot binary I get teh following error: COOT_PREFIX is /programs/coot-Linux-i386-fedora-8 /programs/coot-Linux-i386-fedora-8/bin/coot-real If have found this software to be useful, you are requested to cite: Coot: model-building tools for molecular graphics Emsley P, Cowtan K ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 60: 2126-2132 Part 12 Sp. Iss. 1 DEC 2004 The reference for the REFMAC5 Dictionary is: REFMAC5 dictionary: organization of prior chemical knowledge and guidelines for its use Vagin AA, Steiner RA, Lebedev AA, Potterton L, McNicholas S, Long F, Murshudov GN ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 60: 2184-2195 Part 12 Sp. Iss. 1 DEC 2004 If using "SSM Superposition", please cite: Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions Krissinel E, Henrick K ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 60: 2256-2268 Part 12 Sp. Iss. 1 DEC 2004 Acquiring application resources from /programs/coot-Linux-i386-fedora-8/share/coot/cootrc /programs/coot-Linux-i386-fedora-8/share/coot/cootrc:31: error: unexpected identifier `font_name', expected character `}' INFO:: splash_screen_pixmap_dir /programs/coot-Linux-i386-fedora-8/share/coot/pixmaps INFO:: Colours file: /programs/coot-Linux-i386-fedora-8/share/coot/colours.def loaded There are 116 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/list/mon_lib_list.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/a/ALA.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/a/ASP.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/a/ASN.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/c/CYS.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/g/GLN.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/g/GLY.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/g/GLU.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/p/PHE.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/h/HIS.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/i/ILE.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/l/LYS.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/l/LEU.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/m/MET.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/m/MSE.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/p/PRO.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/a/ARG.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/s/SER.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/t/THR.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/v/VAL.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/t/TRP.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/t/TYR.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/p/PO4.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/s/SO4.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/g/GOL.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/e/ETH.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/c/CIT.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/a/AR.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/a/AD.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/c/CR.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/c/CD.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/g/GR.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/g/GD.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/t/TD.cif There are 2 data in /programs/coot-Linux-i386-fedora-8/share/coot/lib/data/monomers/u/UR.cif Reading coordinate file: /programs/coot-Linux-i386-fedora-8/share/coot/standard-residues.pdb PDB file /programs/coot-Linux-i386-fedora-8/share/coot/standard-residues.pdb has been read. Spacegroup: P 1 Cell: 40.631 109.18 93.243 90 90 90 CATASTROPHIC ERROR:: in gl_extras no GtkGL widget! CATASTROPHIC ERROR:: failed to create Gtk GL widget (Check that your X11 server is working and has (at least) "Thousands of Colors" and supports GLX.) initalize graphics molecules...done. (filter-fileselection-filenames-state) (get-active-map-drag-flag) (use-graphics-interface-state) Loading scheme files from /programs/coot-Linux-i386-fedora-8/share/coot/scheme load "filter.scm" load "matrices.scm" load "coot-utils.scm" load "coot-gui.scm" Coot Scheme Scripting GUI code found and loaded. load "coot-lsq.scm" load "shelx.scm" load "get-ebi.scm" load "local-code.scm" load "hello.scm" Good afternoon root. Welcome to Coot. (set-display-intro-string "Good afternoon root. Welcome to Coot") load "mutate.scm" load "refmac.scm" load "brute-lsqman.scm" load "libcheck.scm" load "gap.scm" load "fitting.scm" load "raster3d.scm" load "povray.scm" load "remote-control.scm" load "generic-objects.scm" load "fascinating-things.scm" load "ncs.scm" load "cns2coot.scm" load "clear-backup.scm" load "tips.scm" load "americanisms.scm" load "group-settings.scm" (set-display-lists-for-maps 0) load "tips-gui.scm" load "extensions.scm" /programs/coot-Linux-i386-fedora-8/bin/coot: line 124: 30192 Segmentation fault $coot_real $* coot-exe: "/programs/coot-Linux-i386-fedora-8/bin/coot-real" coot-version: /programs/coot-Linux-i386-fedora-8/bin/coot-real core: #f No core file found. No debugging any suggestions? Am I missing some dependencies?
