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Messages by Date

• 2025/08/13 Re: [COOT] Metal ion placement in ribosome structures Paul Emsley
• 2025/08/13 Re: [COOT] "atom name" near position Paul Emsley
• 2025/08/13 Re: [COOT] Metal ion placement in ribosome structures Georg Mlynek
• 2025/08/13 Re: [COOT] Metal ion placement in ribosome structures Eleanor Dodson
• 2025/08/11 Re: [COOT] coot-1 on MacOS - origin at corner Alexis Rohou
• 2025/08/10 Re: [COOT] coot-1 on MacOS - origin at corner Paul Emsley
• 2025/08/07 Re: [COOT] coot-1 on MacOS - origin at corner Alexis Rohou
• 2025/08/07 Re: [COOT] coot-1 on MacOS - origin at corner William Scott
• 2025/06/12 Re: [COOT] Giving a 5' nucleotide its PO4 Paul Emsley
• 2025/06/12 Re: [COOT] Giving a 5' nucleotide its PO4 Paul Emsley
• 2025/06/05 Re: [COOT] Python script to process a large list of residues for restrained geometry idealization Paul Emsley
• 2025/06/05 Re: [COOT] Python script to process a large list of residues for restrained geometry idealization Alejandro Buschiazzo
• 2025/06/05 Re: [COOT] Python script to process a large list of residues for restrained geometry idealization White, Mark
• 2025/05/30 Re: [COOT] using sphere_refine with distance restraints Bernhard Lohkamp
• 2025/05/28 Re: [COOT] Trouble installing coot 1.1 in MacOS Alejandro Buschiazzo
• 2025/05/18 Re: [COOT] strange error trying to add alternate conformations to water Paul Emsley
• 2025/04/29 [COOT] R: map fan phan in coot 0.9 and coot 1 DORIANO LAMBA
• 2025/04/29 Re: [COOT] map fan phan in coot 0.9 and coot 1 Eleanor Dodson
• 2025/04/24 Re: [COOT] CCP4 maps don't display across unit cell boundaries Paul Emsley
• 2025/04/24 Re: [COOT] Number of the last created map Eleanor Dodson
• 2025/04/23 Re: [COOT] Number of the last created map Bernhard Lohkamp
• 2025/04/22 Re: [COOT] Synchronize view in 2 Coot windows (Coot 0.9) Bernhard Lohkamp
• 2025/04/21 Re: [COOT] CCP4 maps don't display across unit cell boundaries Paul Emsley
• 2025/04/14 Re: [COOT] How to increase the percentage of favoured regions? Dale Tronrud
• 2025/04/14 Re: [COOT] Synchronize view in 2 Coot windows (Coot 0.9) Chip Lesburg
• 2025/04/14 [COOT] Synchronize view in 2 Coot windows (Coot 0.9) Chip Lesburg
• 2025/04/14 Re: [COOT] How to increase the percentage of favoured regions? Paul Emsley
• 2025/04/14 Re: [COOT] Coot 1.1.15 issue macOS Paul Emsley
• 2025/04/12 Re: [COOT] Coot 1.1.15 issue macOS Xavier Brazzolotto
• 2025/04/12 Re: [COOT] Coot 1.1.15 issue macOS Xavier Brazzolotto
• 2025/04/10 Re: [COOT] Lag when translating view and cycling through NCS chains Lisa Baker
• 2025/04/09 [COOT] Bernhard Lohkamp
• 2025/04/09 [COOT] Further update on my issue below - WinCOOT running incredibly slow on Windows11. Lisa Baker
• 2025/04/09 Re: [COOT] Further update on my issue below - WinCOOT running incredibly slow on Windows11. Bernhard Lohkamp
• 2025/04/09 [COOT] Lisa Baker
• 2025/04/09 Re: [COOT] Lag when translating view and cycling through NCS chains Lisa Baker
• 2025/04/09 Re: [COOT] Lag when translating view and cycling through NCS chains Bernhard Lohkamp
• 2025/04/04 Re: [COOT] Changing RNA types to DNA Biertuempfel, Christian (NIH/NHLBI) [E]
• 2025/04/01 Re: [COOT] Release 1.1.15 Eleanor Dodson
• 2025/03/31 [COOT] Release 1.1.15 Paul Emsley
• 2025/03/27 Re: [COOT] Lag when translating view and cycling through NCS chains Paul Emsley
• 2025/03/26 [COOT] Lag when translating view and cycling through NCS chains Andrew Douw
• 2025/03/26 Re: [COOT] Print the result of a function to a file Paul Emsley
• 2025/03/26 [COOT] Print the result of a function to a file Auffinger Pascal
• 2025/03/25 Re: [COOT] Turning filtering off with map_peaks Auffinger Pascal
• 2025/03/25 Re: [COOT] Changing RNA types to DNA Dan Richman
• 2025/03/25 [COOT] Fwd: Changing RNA types to DNA Paul Emsley
• 2025/03/25 [COOT] Changing RNA types to DNA Dan Richman
• 2025/03/19 Re: [COOT] Turning filtering off with map_peaks Paul Emsley
• 2025/03/18 Re: [COOT] Turning filtering off with map_peaks Auffinger Pascal
• 2025/03/17 [COOT] Release 1.1.14 Paul Emsley
• 2025/03/17 Re: [COOT] How to determine the map maximum value Paul Emsley
• 2025/03/17 Re: [COOT] Turning filtering off with map_peaks Paul Emsley
• 2025/03/17 Re: [COOT] Density value units Paul Emsley
• 2025/03/16 [COOT] Turning filtering off with map_peaks Auffinger Pascal
• 2025/03/16 [COOT] How to determine the map maximum value Auffinger Pascal
• 2025/03/13 Re: [COOT] map filtering Paul Emsley
• 2025/03/13 [COOT] map filtering Auffinger Pascal
• 2025/03/13 [COOT] Density value units Auffinger Pascal
• 2025/02/28 Re: [COOT] dots unable to set radius Paul Emsley
• 2025/02/28 [COOT] dots unable to set radius Auffinger Pascal
• 2025/02/24 Re: [COOT] Saving as a CIF, refining in Phenix Kelvin Lau
• 2025/02/24 Re: [COOT] FW: Coot doesn't show Ramachandran spheres for residues insertion codes Paul Emsley
• 2025/02/24 [COOT] Release 1.1.13 Paul Emsley
• 2025/02/21 [COOT] FW: Coot doesn't show Ramachandran spheres for residues insertion codes Kevin M Jude
• 2025/02/21 [COOT] Transform Map Lukas
• 2025/02/21 [COOT] Saving as a CIF, refining in Phenix Kelvin Lau
• 2025/02/16 Re: [COOT] Coot v1 missing features? Xavier Brazzolotto
• 2025/02/16 Re: [COOT] Coot v1 missing features? Paul Emsley
• 2025/02/10 [COOT] Release 1.1.12 Paul Emsley
• 2025/02/10 [COOT] Release 0.9.8.96 Paul Emsley
• 2025/02/04 Re: [COOT] WinCoot Warning: No valid dictionary found and .coot-preferences Bernhard Lohkamp
• 2025/01/31 Re: [COOT] Loading ligand error : Bad exit status for pyrogen Paul Emsley
• 2025/01/31 [COOT] Loading ligand error : Bad exit status for pyrogen Paul
• 2025/01/30 Re: [COOT] Calculating per-residue map to model correlation Joel Meyerson
• 2025/01/30 Re: [COOT] Calculating per-residue map to model correlation Paul Emsley
• 2025/01/29 Re: [COOT] Calculating per-residue map to model correlation Paul Emsley
• 2025/01/29 Re: [COOT] Calculating per-residue map to model correlation Joel Meyerson
• 2025/01/29 Re: [COOT] Calculating per-residue map to model correlation Eleanor Dodson
• 2025/01/29 [COOT] Calculating per-residue map to model correlation Joel Meyerson
• 2025/01/29 Re: [COOT] WinCoot Warning: No valid dictionary found and .coot-preferences Georg Mlynek
• 2025/01/26 Re: [COOT] Problems with opening coordinate files in moorhen Amie Boal
• 2025/01/26 Re: [COOT] Problems with opening coordinate files in moorhen Paul Emsley
• 2025/01/25 Re: [COOT] Problems with opening coordinate files in moorhen Paul Emsley
• 2025/01/24 [COOT] Problems with opening coordinate files in moorhen Amie Boal
• 2024/12/26 Re: [COOT] Release 1.1.11 Doriano Lamba
• 2024/12/26 Re: [COOT] Release 1.1.11 Bernhard Lohkamp
• 2024/12/15 Re: [COOT] WinCoot Warning: No valid dictionary found and .coot-preferences Paul Emsley
• 2024/12/13 Re: [COOT] WinCoot Warning: No valid dictionary found and .coot-preferences Georg Mlynek
• 2024/12/13 Re: [COOT] WinCoot Warning: No valid dictionary found and .coot-preferences Bernhard Lohkamp
• 2024/12/13 [COOT] WinCoot Warning: No valid dictionary found and .coot-preferences Georg Mlynek
• 2024/12/12 [COOT] Release 1.1.11 Paul Emsley
• 2024/12/07 Re: [COOT] Coot refinement using Python API Paul Emsley
• 2024/12/07 Re: [COOT] Coot -> Moorhen on OSX 15.1.1 Paul Emsley
• 2024/12/06 Re: [COOT] Coot refinement using Python API Joel Meyerson
• 2024/12/05 Re: [COOT] Coot refinement using Python API Paul Emsley
• 2024/12/05 Re: [COOT] Coot refinement using Python API Joel Meyerson
• 2024/12/05 Re: [COOT] Registration now open for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models - In person registration closes tomorrow!!!!! Karen McIntyre - STFC UKRI
• 2024/12/04 Re: [COOT] Coot -> Moorhen on OSX 15.1.1 Paul Emsley
• 2024/12/04 Re: [COOT] Coot refinement using Python API Paul Emsley
• 2024/12/04 Re: [COOT] Coot refinement using Python API Paul Emsley
• 2024/12/04 [COOT] Coot refinement using Python API Joel Meyerson
• 2024/12/03 Re: [COOT] planar Arg Dale Tronrud
• 2024/12/03 Re: [COOT] planar Arg Seth Harris
• 2024/12/03 Re: [COOT] planar Arg Paul Emsley
• 2024/12/03 [COOT] planar Arg Heidi Schubert
• 2024/12/03 Re: [COOT] Coot -> Moorhen on OSX 15.1.1 Kikuti Carlos
• 2024/11/26 Re: [COOT] Coot on OSX 15.1.1 Paul Emsley
• 2024/11/25 Re: [COOT] Coot on OSX 15.1.1 Kikuti Carlos
• 2024/11/24 Re: [COOT] Coot on OSX 15.1.1 Jean-Marc Jeckelmann
• 2024/11/24 Re: [COOT] Coot on OSX 15.1.1 William Scott
• 2024/11/24 [COOT] Coot on OSX 15.1.1 Jean-Marc Jeckelmann
• 2024/11/23 Re: [COOT] Assistance Required: Issue with GUI in Coot Installed via Homebrew Martin Montgomery
• 2024/11/22 Re: [COOT] Preference setting of EM map radius Paul Emsley
• 2024/11/22 [COOT] Preference setting of EM map radius Jean-Marc Jeckelmann
• 2024/11/21 Re: [COOT] Assistance Required: Issue with GUI in Coot Installed via Homebrew Paul Emsley
• 2024/11/21 [COOT] Assistance Required: Issue with GUI in Coot Installed via Homebrew Jingjing
• 2024/11/15 Re: [COOT] scripting conversion of dictionary to pdb Guenter Fritz
• 2024/11/15 Re: [COOT] scripting conversion of dictionary to pdb Paul Emsley
• 2024/11/15 Re: [COOT] Registration now open for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models Karen McIntyre - STFC UKRI
• 2024/11/15 [COOT] scripting conversion of dictionary to pdb Guenter Fritz
• 2024/11/08 Re: [COOT] Registration now open for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models - Early bird deadline for in-person delegates closes MONDAY!!! Karen McIntyre - STFC UKRI
• 2024/11/05 Re: [COOT] Registration now open for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models - Early bird deadline for in-person delegates coming fast!!! Karen McIntyre - STFC UKRI
• 2024/10/25 Re: [COOT] Bursaries available for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models - Deadline for travel bursaries coming fast 31 October 2024!! Karen McIntyre - STFC UKRI
• 2024/10/16 Re: [COOT] Bursaries available for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models - Deadline for travel bursaries coming fast 31 October 2024!! Karen McIntyre - STFC UKRI
• 2024/10/16 Re: [COOT] Registration now open for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models Karen McIntyre - STFC UKRI
• 2024/10/13 Re: [COOT] Help with linking two amino acid side-chains Paul Emsley
• 2024/10/13 Re: [COOT] Help with linking two amino acid side-chains Kelvin Lau
• 2024/10/09 Re: [COOT] Help with linking two amino acid side-chains Michelle Miller
• 2024/10/09 Re: [COOT] Help with linking two amino acid side-chains Michelle Miller
• 2024/10/08 Re: [COOT] Help with linking two amino acid side-chains Kelvin Lau
• 2024/10/08 Re: [COOT] Help with linking two amino acid side-chains Eleanor Dodson
• 2024/10/08 Re: [COOT] Help with linking two amino acid side-chains Kelvin Lau
• 2024/10/08 Re: [COOT] unable to visualize in COOT a CryoEM post-processed map generated in RELION SERGIO BARATA GARCIA
• 2024/10/07 Re: [COOT] Help with linking two amino acid side-chains Michelle Miller
• 2024/10/07 Re: [COOT] Help with linking two amino acid side-chains Paul Emsley
• 2024/10/07 Re: [COOT] Help with linking two amino acid side-chains Keitaro Yamashita
• 2024/10/07 [COOT] Help with linking two amino acid side-chains Michelle Miller
• 2024/10/07 Re: [COOT] unable to visualize in COOT a CryoEM post-processed map generated in RELION Huw Jenkins
• 2024/10/07 Re: [COOT] unable to visualize in COOT a CryoEM post-processed map generated in RELION Paul Emsley
• 2024/10/07 Re: [COOT] unable to visualize in COOT a CryoEM post-processed map generated in RELION SERGIO BARATA GARCIA
• 2024/10/07 [COOT] Bursaries available for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models Karen McIntyre - STFC UKRI
• 2024/10/04 Re: [COOT] unable to visualize in COOT a CryoEM post-processed map generated in RELION Paul Emsley
• 2024/10/04 [COOT] unable to visualize in COOT a CryoEM post-processed map generated in RELION SERGIO BARATA GARCIA
• 2024/10/03 [COOT] Registration now open for CCP4 Study Weekend 2025 - Using software, AI and other methods to advance macromolecular models Karen McIntyre - STFC UKRI
• 2024/09/16 Re: [COOT] 5-letter code not saved in output Paul Emsley
• 2024/09/16 Re: [COOT] get output file name and path through user Paul Emsley
• 2024/09/16 [COOT] get output file name and path through user Nav
• 2024/08/29 Re: [COOT] Coot 1 molecule not centered in MacOS Jaime Larraga
• 2024/08/29 [COOT] Coot 1 molecule not centered in MacOS Chris Richardson
• 2024/08/23 [COOT] 5-letter code not saved in output Kelvin Lau
• 2024/08/16 [COOT] Mutating many chains Alejandro Buschiazzo
• 2024/07/26 Re: [COOT] Prosmart / Restraints on Mac Paul Emsley
• 2024/07/26 Re: [COOT] Prosmart / Restraints on Mac Fernández-Leiro . Rafael
• 2024/07/26 Re: [COOT] Prosmart / Restraints on Mac Paul Emsley
• 2024/07/26 [COOT] Prosmart / Restraints on Mac Fernández-Leiro . Rafael
• 2024/07/26 [COOT] Release 1.1.10 Paul Emsley
• 2024/07/24 [COOT] Bus error when accessing Ramachandran Plot or Kleywegt Plot Markus Meier
• 2024/07/24 [COOT] The carbohydrate module in Coot 0.9.8.95 requests model-level-2-FUC-ALPHA1-6-NAG.tab Markus Meier
• 2024/07/19 [COOT] coot and non-retina display molecule centering issue on MacOS William Scott
• 2024/07/15 Re: [COOT] Insert a atom based on x,y,z coordinates in a python script Nav Mon
• 2024/07/15 Re: [COOT] Insert a atom based on x,y,z coordinates in a python script Paul Emsley
• 2024/07/14 Re: [COOT] Insert a atom based on x,y,z coordinates in a python script Nav
• 2024/07/04 Re: [COOT] duplication of the model during refinement Pedro Matias
• 2024/07/04 Re: [COOT] Strategy for fitting symmetric chains Noha Elhosseiny
• 2024/07/04 Re: [COOT] duplication of the model during refinement Eleanor Dodson
• 2024/07/03 Re: [COOT] duplication of the model during refinement Bernhard Lohkamp
• 2024/07/02 Re: [COOT] COOT Digest - 1 Jul 2024 to 2 Jul 2024 (#2024-40) Oliver Clarke
• 2024/07/02 Re: [COOT] Strategy for fitting symmetric chains Paul Emsley
• 2024/07/02 Re: [COOT] Strategy for fitting symmetric chains Noha Elhosseiny
• 2024/07/01 Re: [COOT] Strategy for fitting symmetric chains Paul Emsley
• 2024/07/01 Re: [COOT] Strategy for fitting symmetric chains Noha Elhosseiny
• 2024/07/01 Re: [COOT] Strategy for fitting symmetric chains Paul Emsley
• 2024/07/01 [COOT] Strategy for fitting symmetric chains Noha Elhosseiny
• 2024/06/17 Re: [COOT] Disable NCS calculations p.auffinger
• 2024/06/17 Re: [COOT] Disable NCS calculations Bernhard Lohkamp
• 2024/06/17 Re: [COOT] Disable NCS calculations Paul Emsley
• 2024/06/17 [COOT] Disable NCS calculations Auffinger Pascal
• 2024/06/14 Re: [COOT] Insert a atom based on x,y,z coordinates in a python script Paul Emsley
• 2024/06/14 [COOT] Insert a atom based on x,y,z coordinates in a python script Nav
• 2024/06/13 Re: [COOT] Coot 1 for a first-timer Paul Emsley
• 2024/06/13 [COOT] Coot 1 for a first-timer David Dranow
• 2024/06/11 Re: [COOT] coot validation dysfunction wufe...@mails.ucas.ac.cn
• 2024/06/11 Re: [COOT] coot validation dysfunction Paul Emsley
• 2024/06/11 Re: [COOT] duplication of the model during refinement Paul Emsley
• 2024/06/11 [COOT] coot validation dysfunction Gu Shaocheng
• 2024/06/11 [COOT] duplication of the model during refinement Elżbieta Dorota Wątor
• 2024/06/10 [COOT] Release 1.1.09 Paul Emsley
• 2024/06/10 [COOT] Release 0.9.8.95 Paul Emsley
• 2024/06/03 Re: [COOT] Custom pop-up windows Marko Hyvonen
• 2024/06/03 Re: [COOT] Custom pop-up windows Paul Emsley
• 2024/06/01 Re: [COOT] Custom pop-up windows Frank Von Delft
• 2024/05/31 Re: [COOT] Custom pop-up windows Marko Hyvonen
• 2024/05/31 Re: [COOT] Custom pop-up windows Daniel Larsson
• 2024/05/31 Re: [COOT] Custom pop-up windows Paul Emsley
• 2024/05/31 [COOT] Custom pop-up windows Marko Hyvonen
• 2024/05/21 Re: [COOT] Difference map in new coot? Paul Emsley
• 2024/05/21 Re: [COOT] Updating maps Paul Emsley
• 2024/05/21 Re: [COOT] Updating maps Murpholino Peligro
• 2024/05/20 Re: [COOT] Updating maps Paul Emsley

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