How does the Extensions->Dock sequence command work?

I've got a polyAla model, so I open the dialog, import a sequence file, click 
the "Sequence closest fragment" or "Sequence all fragments!"

Then I get in the terminal window something like

Sequence: ??QKDIGVKPEFSFN??
Confidence: 0.508934

From    : LQQKDIGVKPEFSFNIP
Chain id: 0     Offset: 114


but nothing seems to have happened. 

has it failed? or worked?

best wishes
Phil
 

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