On 04/07/2011 02:23 AM, Kay Diederichs wrote:
Am 20:59, schrieb Leon Flaks:
I am running coot on 64-bit Fedora 14 installed from binaries
compiled for centos 5 with both gtk and python. I made a number of
links to so libraries somewhat similar to the ones described on this
list last month. However, there is another issue I ran into, which
prevented coot from starting. selinux is enabled and it is
complaining about executable stack set on the library libgmp.so.3 .
This library comes with coot tarbal. There is another copy of the
same library on the system which has this flag set properly, but of
course, coot uses the one that comes with it.
To fix this issue I had to run 'execstack -c
$coot_root_dir/lib/libgmp.so.3.3.0', which solved my problem. Coot is
installed on the nfs server, so this command had to be executed on
the server as root. Coot is happy after that and runs without problems.
However, every time I download the new version (I tried 3455
yesterday), I have to fix this stack flag.
Would it be possible to get it done on the server, so that binaries
that come with the tarbal have it fixed already?
Thanks,
Leon
why not simply delete coot's version of libgmp.so.3.3.0 after
downloading it? coot then should find and use the system-supplied
library.
HTH,
Kay
Thanks for the reply!
I'll test it next week. But how is your suggestion any better then the
one I was doing? rm command is shorter then execstack ;-) but you need
to remove the link to libgmp.so.3 also. Would it be better to have it
fixed in the binary?
Leon
--
Leonid Flaks
Phone: (631) 344-2682
Fax : (631) 344-2741
