On 15 Aug 2011, at 21:39, Kevin Keating wrote: > Huw, I checked the B-factors under WinCoot using the new-style monomer > library, and I'm seeing the same B-factors as you. I'm not sure if the large > differences between the backbone and base are intentional or not. Paul, do > you happen to know where those numbers are from?
Done a bit of digging and they come from standard-residues.pdb. Looking back through some old structures they've been the same for a while so it's nothing to do with the current problems. I don't know if this helps but when I use "get residue info" on a nucleotide I get: Failed to find atom name quads for residue type U in the console but the residue info box pops up fine. Huw -- Dr Huw Jenkins Astbury Centre for Structural Molecular Biology University of Leeds
