Try command line: http://www.biop.ox.ac.uk/coot/doc/coot.html#Building-Links-and-Loops
> I recently upgraded to Ubuntu 11.10 from Ubuntu 11.04. You can also try to build coot from scratch for the Oneiric: http://www.biop.ox.ac.uk/coot/build-install-coot-from-scratch.html and see if the issue is gone. -- Coot verendus est
