I got the same problem before.  I think the xquartz 2.7.0 upgrade solved that.  

-- Jianghai




On Nov 9, 2011, at 1:52 PM, Nat Echols wrote:

> Hi--
> 
> I'm seeing sporadic errors running Coot on Lion - every
> (approximately) 1 out of 5 attempts, it starts up with the viewport
> rendered incorrectly, as shown in the attached image.  Everything else
> appears to work, I just can't get it to display anything.  When this
> happens, it spits out the errors below on the console.  The rest of
> the time, it works normally with no apparent problems.
> 
> This is using one of Bill's standalone builds
> (Coot_10.7_64bit_3632_standalone.tar.gz), but someone else mentioned
> having the same problem using the binary Fink distribution (which I
> guess must be very similar).
> 
> -Nat
> 
> (use-graphics-interface-state)
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSGetWindowBounds
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorFailure: Set a breakpoint @ CGErrorBreakpoint() to catch
> errors as they are logged.
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSGetSurfaceBounds
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSGetWindowBounds
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSGetSurfaceBounds
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSGetWindowBounds
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSGetSurfaceBounds
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> Nov  9 10:48:04 tanstaafl.local coot-real[69060] <Error>:
> kCGErrorIllegalArgument: CGSBindSurface: Invalid window 0xbb22
> <bad_coot.png>

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