On 23/11/11 16:04, Jianghai Zhu wrote:
I can take the D-PHE cif out and rename it to DPH.

Yes...

But the peptide bonds at the N and C terminus of DPH are broken in COOT since 
COOT doesn't consider DPH as an amino acid.

To be more precise, Coot does not consider DPH to be a standard amino acid (it isn't).

Any way to circumvent that?


I am a bit confused about what is going on - Coot quite happily draws the N-C bonds in gramicidins.

You should get a dotted line for a LINK record if you have such a thing...

Paul.

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