On 17/01/12 08:33, Dayana Nisbar wrote:
How to change the map level from rmsd to sigma?

You can't. Electron density levels should not be expressed in terms of sigma. Sigma refers to probability distributions - and an electron density map is not one of those. I used to not understand this and there may be some references to "sigma" in the code/interface which I need to clean up.


And what is the best way to pick up water?

To pick *a* water, this is what I use:

(add-key-binding "Add Water +"  "W"
   (lambda ()
     (blob-under-pointer-to-screen-centre)
     (place-typed-atom-at-pointer "Water")
     (refine-active-residue)))

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