Hi all, I was trying to figure out how coot was coloring by b-factor (so I could use this info to color by ramachandran probability, which I had assigned to the B-factor column), and I noticed a strange thing.
I expected coloring to be on a non-repeating scale, say from blue to red, but it isn't - it goes from blue (0-5) to pale green (10-20), to bright green (25-35) back to pale green (40-45), to orange (50-65), back to pale green again (70-85) to red (>85) See picture of polyala helix here, in which b-factor increases by 5 per residue, from 0 (N-term) to 100 (C-term) PDB: https://www.dropbox.com/s/talut0vahxf1g4y/b_factor_scale_helix_0_100.pdb?dl=0 Picture: https://www.dropbox.com/s/obmmcrstc45a8e6/b_factor_scale_helix.png?dl=0 I'm not sure whether this is an intentional decision or a bug - thoughts? Cheers,
