Thanks,
Both could be useful- -c '(command)(command)'  when the parameters would be 
different each time and avoid creating a script file for each invocation, and 
-script scriptfilename for something I will use often but not always so don't 
want to put in my startup file(s).
eab

On 11/17/2017 03:00 AM, Martín Martínez Ripoll wrote:
We have used it in this way...

coot --pdb  input.pdb   ---auto  input.mtz   --script  script.com

and then, in file "script.com", you write the corresponding instructions...

(set-go-to-atom-molecule 0)
(set-go-to-atom-chain-residue-atom-name "B" 42 " CA ")

Martin
_________________________________________
-----Mensaje original-----
De: CCP4 bulletin board [mailto:[email protected]] En nombre de Paul
Emsley
Enviado el: jueves, 16 de noviembre de 2017 17:32
Para: [email protected]
Asunto: Re: [ccp4bb] Scripting for COOT

On 16/11/2017 13:28, Edward A. Berry wrote:
(set-go-to-atom-molecule 0)
(set-go-to-atom-chain-residue-atom-name "B" 42 " CA ")

Would those be also on the command line, or where?

You can use them on the command line like this:

coot --pdb input.pdb -c '(set-go-to-atom-molecule
0)(set-go-to-atom-chain-residue-atom-name "B" 42 " CA ")'

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