We are pleased to announce the release of Coot-0.8.9

http://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/source/releases/coot-0.8.9.tar.gz

Binaries here:

https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/binaries/release/

Mac and Windows binaries will be forthcoming in due course.

Regards,

Paul.

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 Release 0.8.9

  o FEATURE: Improved Ramachandran Plot, now with residue selection

  o FEATURE: Use of threads and accumulation in map contouring

  o FEATURE: secondary structure interface added to the the API

  o FEATURE: delete-chain and delete-sidechains-for-chain added to the API

  o FEATURE: Added a user-defined modelling tool-bar button to refine tandem 
residues

  o FEATURE: experimental peptide orientation optimisation function added (also 
in mini-rsr)

  o CHANGE:  Refinement speed-up

  o CHANGE:  Add-terminal-residue speed-up

  o CHANGE:  Glyo module improved with distance restraints and better GUI

  o CHANGE:  Better density fit graph scaling

  o CHANGE:  Use ETKDG for embedding in pyrogen

  o CHANGE:  Use less precision on writing the aniso ADPs for SHELX ins

  o CHANGE:  Optional Fourier Transform-based Ramachandran Plot target function 
added

  o CHANGE:  Bond-thicknesses improved in colour-by-chain.

  o CHANGE:  Robust MOL-file parsing added to lidia

  o CHANGE:  A density value histogram has been added to the map properties 
dialog

  o CHANGE:  Pepflip residue indexing improved

  o CHANGE:  Updated Ligand fitting in the tutorial

  o BUG-FIX: Hydrogen atoms are no longer used in rotamer clash score

  o BUG-FIX: Geman-McClure distance restraints activation bug fix

  o BUG-FIX: delete-atom no longer crashes when given an invalid model molecule 
number

  o BUG-FIX: Adding a terminal OXT no longer causes a crash

  o BUG-FIX: Ramachandran plot is updated on "Undo"

  o BUG-FIX: Chiral centre distortion representation fixed

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