Hi Darin, The line
>guile: error while loading shared libraries: libguile.so.17: cannot open >shared object file: No such file or directory tells you what the (first) problem is: libguile is not installed. (I write "first" because I'd expect other libraries to be missing as well - try ldd </where/ever/coot-bin/is/coot-bin and check for "not found") Thus you are trying to run a program without having the infrastructure for it. CCP4 comes with coot version 0.8.9.2 and the libguile library. Does this work for you? HTH, Kay On Mon, 20 May 2019 23:32:29 +0100, Darin Lory <[email protected]> wrote: >Coot-Gurus, > >i downloaded and installed both the >coot-Linux-x86_64-scientific-linux-7.5-pre-release-gtk2-python and >coot-Linux-x86_64-scientific-linux-7.6-pre-release-gtk2-python pre-compiled >binaries to run a RHEL 7.6 server. > >I read through the FAQ >https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs/coot-faq.html > >version coot-Linux-x86_64-scientific-linux-7.5-pre-release-gtk2-python: > >$ ./coot >::: DYLD_FALLBACK_LIBRARY_PATH is >INFO:: Reading coordinate file: >/apps/packages/coot-installer/coot-Linux-x86_64-scientific-linux-7.5-pre-release-gtk2-python/share/coot/standard-residues.pdb > PDB file > /apps/packages/coot-installer/coot-Linux-x86_64-scientific-linux-7.5-pre-release-gtk2-python/share/coot/standard-residues.pdb > has been read. >Spacegroup: P 1 > >(coot-bin:20503): Gdk-ERROR **: 22:21:44.358: The program 'coot-bin' received >an X Window System error. >This probably reflects a bug in the program. >The error was 'BadValue (integer parameter out of range for operation)'. > (Details: serial 321 error_code 2 request_code 149 minor_code 3) > (Note to programmers: normally, X errors are reported asynchronously; > that is, you will receive the error a while after causing it. > To debug your program, run it with the --sync command line > option to change this behavior. You can then get a meaningful > backtrace from your debugger if you break on the gdk_x_error() function.) >./coot: line 310: 20503 Trace/breakpoint trap (core dumped) $coot_bin "$@" >guile: error while loading shared libraries: libguile.so.17: cannot open >shared object file: No such file or directory >failed to launch the crash catcher > >version coot-Linux-x86_64-scientific-linux-7.6-pre-release-gtk2-python > >coot-Linux-x86_64-scientific-linux-7.6-pre-release-gtk2-python/bin/coot >INFO:: Reading coordinate file: >/apps/packages/coot-installer/coot-Linux-x86_64-scientific-linux-7.6-pre-release-gtk2-python/share/coot/standard-residues.pdb > PDB file > /apps/packages/coot-installer/coot-Linux-x86_64-scientific-linux-7.6-pre-release-gtk2-python/share/coot/standard-residues.pdb > has been read. >Spacegroup: P 1 > >(coot-bin:22592): Gdk-ERROR **: 22:30:09.321: The program 'coot-bin' received >an X Window System error. >This probably reflects a bug in the program. >The error was 'BadValue (integer parameter out of range for operation)'. > (Details: serial 321 error_code 2 request_code 149 minor_code 3) > (Note to programmers: normally, X errors are reported asynchronously; > that is, you will receive the error a while after causing it. > To debug your program, run it with the --sync command line > option to change this behavior. You can then get a meaningful > backtrace from your debugger if you break on the gdk_x_error() function.) >/apps/packages/coot-installer/coot-Linux-x86_64-scientific-linux-7.6-pre-release-gtk2-python/bin/coot: > line 310: 22592 Trace/breakpoint trap (core dumped) $coot_bin "$@" >guile: error while loading shared libraries: libguile.so.17: cannot open >shared object file: No such file or directory >failed to launch the crash catcher > >Best regards, > >-Darin > >Darin Lory > >######################################################################## > >To unsubscribe from the COOT list, click the following link: >https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=COOT&A=1 ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=COOT&A=1
