This an error I'm receiving with coot 0.8.9.1 Scientific Linux 7.4 with Python2/GTK2 on RHEL 7.6 server.
I'm trying to integrate coot and PyMOL with Phenix. From my Phenix guru: For Coot, I would recommend using 0.8.9.x series $ which coot /apps/packages/coot-Linux-x86_64-scientific-linux-7.4-gtk2-python/bin/coot $ coot /apps/packages/coot-Linux-x86_64-scientific-linux-7.4-gtk2-python/libexec/coot-bin: error while loading shared libraries: libsrfftw.so.2: cannot open shared object file: No such file or directory guile: error while loading shared libraries: libltdl.so.3: cannot open shared object file: No such file or directory [Projects]$ coot --no-guano /apps/packages/coot-Linux-x86_64-scientific-linux-7.4-gtk2-python/libexec/coot-bin: error while loading shared libraries: libsrfftw.so.2: cannot open shared object file: No such file or directory guile: error while loading shared libraries: libltdl.so.3: cannot open shared object file: No such file or directory Environment: rpm -qa |grep guile guile-devel-2.0.9-5.el7.i686 compat-guile18-devel-1.8.8-14.el7.x86_64 guile-NLopt-devel-2.4.2-2.el7.x86_64 guile-2.0.9-5.el7.x86_64 graphviz-guile-2.30.1-21.el7.x86_64 compat-guile18-1.8.8-14.el7.x86_64 guile-NLopt-2.4.2-2.el7.x86_64 guile-devel-2.0.9-5.el7.x86_64 guile-2.0.9-5.el7.i686 $ env |grep coot LD_LIBRARY_PATH=/apps/packages/coot-Linux-x86_64-scientific-linux-7.4-gtk2-python/lib:/usr/lib64/openmpi/lib:/usr/local/cuda/lib64:/usr/local/cuda/lib:/usr/lib:/usr/local/lib64:/usr/local/lib:/apps/packages/cryoEF_v1.1.0/lib:/usr/local/relion3/lib: PATH=/apps/packages/coot-Linux-x86_64-scientific-linux-7.4-gtk2-python/bin:/apps/packages/java/jre1.8.0_201/jre/bin:/apps/packages/java/jre1.8.0_201/bin:/usr/lib64/openmpi/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/usr/local/cuda-10.0/lib64:/usr/local/bin:/usr/local/relion3/bin:/apps/packages/cistem/cistem-1.0.0-beta:/apps/packages/cryoEF_v1.1.0/bin:/apps/packages/scripts/python2:/apps/packages/unblur/bin:/apps/packages/summovie/1.0.2/summovie_1.0.2/bin:/apps/packages/motioncor2:/apps/packages/chimera/bin:/usr/local/cuda/bin _LMFILES_=/etc/modulefiles/mpi/openmpi-x86_64:/etc/modulefiles/java/1.8.0_201:/etc/modulefiles/coot/0.8.9.1 LOADEDMODULES=mpi/openmpi-x86_64:java/1.8.0_201:coot/0.8.9.1 ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=COOT&A=1
