Would now be a good time to suggest that mmCIF file are retrieved instead of PDB files. PDB files are not available for an increasing amount of PDB entries, whereas mmCIF files are available for every PDB entry.
The fetch link can simply be changed to: https://www.ebi.ac.uk/pdbe-srv/view/files/6fak.cif Thanks John -----Original Message----- From: Mailing list for users of COOT Crystallographic Software <[email protected]> On Behalf Of Bernhard Lohkamp Sent: 25 April 2020 12:32 To: [email protected] Subject: Re: Wincoot 0.9 There are quite a few bugs in the current 0.9 beta release. I am in the process of updating it. I will post some more instructions on how to "install" and run it then too. Sorry about the delay - blame the corona virus... and MS... and Paul ;-) B On 25/04/2020 01:56, Daniel Asarnow wrote: > My apologies for the confusion! > > It was posted by Bernhard /Lohkamp/ 12 days ago: > https://github.com/bernhardcl/coot/releases > <https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgit > hub.com%2Fbernhardcl%2Fcoot%2Freleases&data=02%7C01%7CBernhard.Lohkamp > %40KI.SE%7Cb227cc1373714a6d030008d7e8ab2f8a%7Cbff7eef1cf4b4f32be3da1dd > a043c05d%7C0%7C0%7C637233694250652773&sdata=bBZKCv6781ssG5AvigFExg0kzm > yzTWKwoKDJxF0oA0s%3D&reserved=0> > > Best, > -da > > > On Fri, Apr 24, 2020 at 4:49 PM Bernhard Rupp > <[email protected] <mailto:[email protected]>> wrote: > > If you could reveal where you got wincoot 0.9.x from, one could > perhaps assist…____ > > See no message to this effect maybe got lost…____ > > __ __ > > Cheers, BR____ > > __ __ > > *From:* Mailing list for users of COOT Crystallographic Software > <[email protected] <mailto:[email protected]>> *On Behalf Of > *Daniel Asarnow > *Sent:* Friday, April 24, 2020 14:48 > *To:* [email protected] <mailto:[email protected]> > *Subject:* Wincoot 0.9____ > > __ __ > > Hi all,____ > > Bernhard kindly posted a Wincoot build based on 0.9 recently. I was > wondering if anyone was using it, and what is the correct way to use > the package (with just /bin, /include, /lib provided).____ > > __ __ > > Thanks & best,____ > > -da____ > > __ __ > > > ---------------------------------------------------------------------- > -- > > To unsubscribe from the COOT list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=COOT&A=1 > > <https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jiscmail.ac.uk%2Fcgi-bin%2Fwebadmin%3FSUBED1%3DCOOT%26A%3D1&data=02%7C01%7CBernhard.Lohkamp%40KI.SE%7Cb227cc1373714a6d030008d7e8ab2f8a%7Cbff7eef1cf4b4f32be3da1dda043c05d%7C0%7C0%7C637233694250662769&sdata=q9chryiHfYg4jEmwdTSkSUKwPZR6puKhTzCkkxtr57E%3D&reserved=0> > ____ > > > ---------------------------------------------------------------------- > -- > > To unsubscribe from the COOT list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=COOT&A=1 > <https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww > .jiscmail.ac.uk%2Fcgi-bin%2Fwebadmin%3FSUBED1%3DCOOT%26A%3D1&data=02%7 > C01%7CBernhard.Lohkamp%40KI.SE%7Cb227cc1373714a6d030008d7e8ab2f8a%7Cbf > f7eef1cf4b4f32be3da1dda043c05d%7C0%7C0%7C637233694250662769&sdata=q9ch > ryiHfYg4jEmwdTSkSUKwPZR6puKhTzCkkxtr57E%3D&reserved=0> > > -- *************************************************** Dr. Bernhard Lohkamp | Associate Professor/Lektor/Docent Div. Molecular Structural Biology/Biomedicum D9 Dept. of Medical Biochemistry and Biophysics (MBB) | Karolinska Institutet SE-171 77 Stockholm Sweden +46 8 52487055 [email protected] | ki.se När du skickar e-post till Karolinska Institutet (KI) innebär detta att KI kommer att behandla dina personuppgifter. Här finns information om hur KI behandlar personuppgifter<https://ki.se/medarbetare/integritetsskyddspolicy>. Sending email to Karolinska Institutet (KI) will result in KI processing your personal data. You can read more about KI’s processing of personal data here<https://ki.se/en/staff/data-protection-policy>. ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=COOT&A=1 ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=COOT&A=1
