I'm noticing some bad behavior in Coot 0.9.5.1-pre (using the OSX version from ccpem, though I'm working here with crystal structures).
I keep Show Environment Distances turned on. When I perform SSM Superpose and then select an atom in the moving molecule, I see the environment distances to the symmetry-related atoms of the moving molecule (and this is with "Show Symmetry" deselected for the moving molecule; the symmetry atoms are not shown). What's more, the symmetry-related atoms of the moving molecule appear to have been transformed in some way that creates new clashes with the moving molecule, ie not using the same matrix that was used for the moving molecule. I have to set the master switch to Symmetry Off to remove the apparent clashes. Best wishes Kevin -- Kevin Jude, PhD (he/him/his) Structural Biology Research Specialist, Garcia Lab Howard Hughes Medical Institute Stanford University School of Medicine Beckman B177, 279 Campus Drive, Stanford CA 94305 Phone: (650) 723-6431 ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
