The "Check/Delete Water" function under “Validate" would be more useful to me 
if it were possible to ignore hydrogen atoms in the distance calculations. 
There seems to be no distance window that works simultaneously for water O-O 
distances, where riding hydrogens are almost never present, and water O-protein 
distances, where the protein almost always carries riding hydrogens. 

A check box that directs the program to ignore hydrogens in the distance 
calculations would be very helpful.

Thanks for a wonderful program that makes my professional life better and more 
productive. 

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