Did you read the blog post mentioned by Murpholino Peligro?
Paul
On 08/11/2021 19:16, Kenneth Satyshur wrote:
Kenneth A. Satyshur, M.S., Ph.D.
Senior Scientist,
College of Ag and Life Sciences: Department of Bacteriology;
School of Medicine and Public Health:
Departments of Biomolecular Chemistry,
Neuroscience, Oncology, and Carbone Cancer Center
(Small Molecule Screening Facility)
University of Wisconsin-Madison
Madison, Wisconsin, 53706
608-215-5207
------------------------------------------------------------------------------------------------------------
*From:* murpholi...@gmail.com <murpholi...@gmail.com>
*Sent:* Monday, November 8, 2021 1:05 PM
*To:* Kenneth Satyshur <kenneth.satys...@wisc.edu>; COOT@jiscmail.ac.uk
<COOT@jiscmail.ac.uk>
*Subject:* Re: removing dotted lines
Dear Kenneth.
For this to work you need to do:
Calculate->Scripting -> Python
and then write
set_draw_missing_residues_loops(0)
(in the window that emerges)
and then press enter.
I am attaching your message below and adding this to the coot mailing list just in case someone else does
not find the python scripting window.
PS I guess you can put this line in the configuration file for coot.
>>>
coot >> set_draw_missing_residues_loops(0)
BL WARNING:: Python error!
(Or you attempted to use an invalid guile command...)
Python error:
name 'set_draw_missing_residues_loops' is not defined
<type 'exceptions.NameError'>
coot >>
Does not work.
kas
Kenneth A. Satyshur, M.S., Ph.D.
Senior Scientist,
College of Ag and Life Sciences: Department of Bacteriology;
School of Medicine and Public Health:
Departments of Biomolecular Chemistry,
Neuroscience, Oncology, and Carbone Cancer Center
(Small Molecule Screening Facility)
University of Wisconsin-Madison
Madison, Wisconsin, 53706
608-215-5207
<<<
El lun, 8 de nov. de 2021 a la(s) 12:46, Kenneth Satyshur (kenneth.satys...@wisc.edu
<mailto:kenneth.satys...@wisc.edu>) escribió:
coot >> set_draw_missing_residues_loops(0)
BL WARNING:: Python error!
(Or you attempted to use an invalid guile command...)
Python error:
name 'set_draw_missing_residues_loops' is not defined
<type 'exceptions.NameError'>
coot >>
Does not work.
kas
Kenneth A. Satyshur, M.S., Ph.D.
Senior Scientist,
College of Ag and Life Sciences: Department of Bacteriology;
School of Medicine and Public Health:
Departments of Biomolecular Chemistry,
Neuroscience, Oncology, and Carbone Cancer Center
(Small Molecule Screening Facility)
University of Wisconsin-Madison
Madison, Wisconsin, 53706
608-215-5207
------------------------------------------------------------------------------------------------------------
*From:* Mailing list for users of COOT Crystallographic Software
<COOT@JISCMAIL.AC.UK
<mailto:COOT@JISCMAIL.AC.UK>> on behalf of murpholi...@gmail.com
<mailto:murpholi...@gmail.com>
<murpholi...@gmail.com <mailto:murpholi...@gmail.com>>
*Sent:* Wednesday, November 3, 2021 10:41 AM
*To:* COOT@JISCMAIL.AC.UK <mailto:COOT@JISCMAIL.AC.UK> <COOT@JISCMAIL.AC.UK
<mailto:COOT@JISCMAIL.AC.UK>>
*Subject:* Re: removing dotted lines
https://pemsley.github.io/coot/blog/2020/06/25/turn-off-missing-loops.html
<https://pemsley.github.io/coot/blog/2020/06/25/turn-off-missing-loops.html>
|set_draw_missing_residues_loops(0)|
El mié, 3 de nov. de 2021 a la(s) 09:18, Thomas, Leonard M. (lmtho...@ou.edu
<mailto:lmtho...@ou.edu>)
escribió:
Hello,
Just a quick question, is there an easy way to toggle off and on the
lines showing the end and start
of a chain were there are missing residues? I have one initial
structure that has a bunch of
fragments and the lines go all over the place making any possible
analysis next to impossible.
Thanks,
Len Thomas
Leonard Thomas, Ph.D.
Biomolecular Structure Core, Director
Oklahoma COBRE in Structural Biology
Price Family Foundation Institute of Structural Biology
University of Oklahoma
Department of Chemistry and Biochemistry
101 Stephenson Parkway
Norman, OK 73019-5251
Office: (405)325-1126
lmtho...@ou.edu <mailto:lmtho...@ou.edu>
http://www.ou.edu/structuralbiology/cobre-core-facilities/mcl
<http://www.ou.edu/structuralbiology/cobre-core-facilities/mcl>
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