First - are they in the same spacegroup but on different origins? If that
is so it is very easy to first shift A to B (match molecule to reference,
then just recalculate structure factors and redo the maps..
But if they are in different cells/spacegroups

But when I tried map tools/ transform map by LSQ fit, and specified
coordinates to match I got a guile error - over to Paul I guess??

On Sun, 14 Nov 2021 at 18:38, Murpholino Peligro <murpholi...@gmail.com>
wrote:

> Hi all
> I have two coordinates (A.pdb & B.pdb) along with their respective maps
> (A.mtz, B.mtz).
> I would like to superpose A with B.
> Can somebody explain in detail how to achieve this in coot?
>
> I know how to do it in pymol (
> https://pymolwiki.org/index.php/Matrix_Copy)...then I export maps and
> pdbs to coot... but maybe that is too much work...
>
> Thanks
>
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