Hi Coot experts,
My wincoot 0.9.4.1 could not open EM map, downloaded from EMDB, while
coot under linux works fine. Because I have to work remotely, the coot
under linux is very slow. Is there any way to make the wincoot work on
.map in CCP4 format?
Thanks for your help.
Best,
Zheng
CCP4 map filename: C:\Users\zz\coot_tutorial\emd_3908.map
INFO:: map file type was determined to be CCP4 type
slurp_fill_xmap_from_map_file() callled with check_only 1
n_cols 160
n_rows 160
n_sections 160
mode 2
debug:: start and range 0 0 0 range 160 160 160
debug:: cell 224 224 224 90 90 90
axis order 1 2 3
debug:: slurp_fill_xmap_from_map_file() returning 1
slurp_fill_xmap_from_map_file() callled with check_only 0
n_cols 160
n_rows 160
n_sections 160
mode 2
debug:: start and range 0 0 0 range 160 160 160
debug:: cell 224 224 224 90 90 90
axis order 1 2 3
origin 0 0 0
::::EMDATABANK.org::::EMD-3908::::
debug:: slurp_map() grid Nuvw = ( 160, 160, 160)
debug:: slurp_map() gr Nuvw = ( 160, 160, 160)
debug:: slurp_map() i0 uvw = ( 0, 0, 0) gr_max uvw = ( 159, 159, 159)
DEBUG:: thread fill sections 0 to 20
DEBUG:: thread fill sections 20 to 40
DEBUG:: thread fill sections 40 to 60
DEBUG:: thread fill sections 60 to 80
DEBUG:: thread fill sections 80 to 100
DEBUG:: thread fill sections 100 to 120
DEBUG:: thread fill sections 120 to 140
DEBUG:: thread fill sections 140 to 160
DEBUG:: slurping: done 0 20
DEBUG:: slurping: done 60 80
DEBUG:: slurping: done 80 100
DEBUG:: slurping: done 40 60
DEBUG:: slurping: done 120 140
DEBUG:: slurping: done 140 160
DEBUG:: slurping: done 100 120
DEBUG:: slurping: done 20 40
DEBUG:: thread join finished
DEBUG:: coot::util::slurp_parse_xmap_data(): returning status 1
debug:: slurp_fill_xmap_from_map_file() returning 1
INFO:: map read 215 milliseconds
Map statistics: mean: 0.000174783 st.d: 0.031613
Map statistics: min: -0.555015, max: 0.83732
-0.537611 2
-0.502803 4
-0.467994 8
-0.433186 18
-0.398378 34
-0.363569 83
-0.328761 186
-0.293952 360
-0.259144 623
-0.224336 969
-0.189527 1768
-0.154719 3021
-0.119911 6482
-0.0851021 33296
-0.0502937 255972
-0.0154853 2449589
0.0193231 1106506
0.0541315 183885
0.0889399 25625
0.123748 7508
0.158557 4426
0.193365 3445
0.228173 2752
0.262982 2257
0.29779 1846
0.332599 1482
0.367407 1065
0.402215 831
0.437024 689
0.471832 472
0.506641 307
0.541449 222
0.576257 135
0.611066 58
0.645874 38
0.680683 23
0.715491 9
0.750299 3
0.785108 0
0.819916 1
0.854725 0
INFO:: n grid points: 4096000
INFO:: mean before filtering: 0.000174783
INFO:: variance before filtering: 0.000999379
INFO:: filter by ignoring 52351 of 4096000 counts ( = 1.278%) with
values around -0.0007962 from bin 3980 of 10000
------------------------- em 1 contour_level 0.143176
Map extents: ..... 160 160 160
Map mean: ........ 0.000187369
Map rmsd: ........ 0.0318168
Map maximum: ..... 0.83732
Map minimum: ..... -0.555015
DEBUG:: combobox_get_imol() imol: 0
show_select_map_dialog ()
save_previous_map_colour (0)
get_map_colour (0)
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