Hi Paul, Thank you very much for your reply. I checked my memory. I still have 12.83 GB available. I was able to do the “All-atom refine” in Coot 0.9.6 EL but not 0.9.8.2. And I encountered this error when I do real space refinement with several residues. Therefore, I do think that the problem might be due to lack of restraint library for proteins.
[cid:image001.png@01D87F48.49E1D760] Best, Zhen From: Paul Emsley <pems...@mrc-lmb.cam.ac.uk> Date: Monday, June 13, 2022 at 17:03 To: Zhen <zg2...@columbia.edu>, COOT@JISCMAIL.AC.UK <COOT@JISCMAIL.AC.UK> Subject: [EXTERNAL] Re: Mac Coot 0.9.8.2 crash for All-atom Refine On 13/06/2022 21:35, Zhen wrote: > I have installed on my mac Coot 0.9.8.2 (macOS Monterey version 12.4). Every > time when I clicked “All-atom Refine”, the coot crashed. I also encountered > errors when I do Real Space Refinement. > The error was 'BadAlloc (insufficient resources for operation)'. My guess is that you don't have enough memory to turn on all atom refinement. Coot could (should?) do a better job at telling you that. Paul. ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
