Hi Paul,

Thank you very much for your reply. I checked my memory. I still have 12.83 GB 
available. I was able to do the “All-atom refine” in Coot 0.9.6 EL but not 
0.9.8.2. And I encountered this error when I do real space refinement with 
several residues. Therefore, I do think that the problem might be due to lack 
of restraint library for proteins.

[cid:image001.png@01D87F48.49E1D760]

Best,
Zhen
From: Paul Emsley <pems...@mrc-lmb.cam.ac.uk>
Date: Monday, June 13, 2022 at 17:03
To: Zhen <zg2...@columbia.edu>, COOT@JISCMAIL.AC.UK <COOT@JISCMAIL.AC.UK>
Subject: [EXTERNAL] Re: Mac Coot 0.9.8.2 crash for All-atom Refine

On 13/06/2022 21:35, Zhen wrote:
> I have installed on my mac Coot 0.9.8.2 (macOS Monterey version 12.4). Every 
> time when I clicked “All-atom Refine”, the coot crashed. I also encountered 
> errors when I do Real Space Refinement.


> The error was 'BadAlloc (insufficient resources for operation)'.

My guess is that you don't have enough memory to turn on all atom refinement.

Coot could (should?) do a better job at telling you that.

Paul.

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