Hi Everyone, As an update to my issue. I went through and deinstalled and reinstalled XQuartz versions 2.8.0 through 2.8.4-rc1 (December 20th version) and I still have the same issue so it doesn't seem XQuartz is the culprit. Andy Mesecar
On Tue, Dec 20, 2022 at 6:00 PM Andrew Mesecar <amese...@purdue.edu> wrote: > Hi everyone, > > I am having a similar issue as others with recent software versions. Here > are the vitals: > > MacOS Ventura 13.1 > > MacBook Pro 16-inch > > 2.4 GHz 8-Core Intel Core I9 > > 64 GB 2667 MHz DDR4 > > > > XQuartz 2.8.3 > > Coot 0.9.8.6 > > CCP4 8.0.007 > > Phenix 1.20.1-4487 > > > > Everything seems to work fine in going from clicking the COOT button in > Phenix to COOT launching properly and bringing up structure and density > maps. However, once I click on “Delete Atom” and then “Water Molecule” and > then click on the actual water molecule the Coot main window > closes/disappears. I have to close out XQuartz and then relaunch. I also > tried deleting a carbon atom in a side chain or the actual side chain and > the same thing happens. > > > Thanks for any advice you can give. > > > Andy > -- > *Andrew D. Mesecar* > Distinguished Professor of Biochemistry > Walther Professor of Cancer Structural Biology > Interim Director, Purdue Center for Cancer Research > E-Mail: amese...@purdue.edu > Homepage: https://www.science.purdue.edu/mesecar/index.html > _____________________________________________ > *Research Lab Contact Information:* > Hockmeyer Hall of Structural Biology > Room 311 > 240 S. Martin Jischke Drive > West Lafayette, IN 47907-1971 > 765-494-1924 > ________________________________ > > -- *Andrew D. Mesecar* Distinguished Professor of Biochemistry Walther Professor of Cancer Structural Biology Interim Director, Purdue Center for Cancer Research E-Mail: amese...@purdue.edu Homepage: https://www.science.purdue.edu/mesecar/index.html _____________________________________________ *Research Lab Contact Information:* Hockmeyer Hall of Structural Biology Room 311 240 S. Martin Jischke Drive West Lafayette, IN 47907-1971 765-494-1924 ________________________________ ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
