Hi there,
I am running COOT 0.9.8.5 on a mac and I am writing to inquire about the
ability to change the predifined settings to open an EM map at a e.g. 10 Å
radius.
Currently, when I load an EM map in Coot, I need to manually adjust the radius
in the Edit > Map Parameters... menu to a default value of 10 Å. However, I
would prefer to automate this process by setting the EM map radius via Scheme
scripting or by adjusting a configuration file to retain this setting across
sessions.
I have attempted the following in the Scheme console:
(set-density-size-em 10.0)
(set-map-radius-em 10.0)
(set-density-size-em-from-widget 10.0)
Unfortunately, these commands result in "Unbound variable" errors, suggesting
that either the necessary functionality isn't exposed in the Scheme interface,
or I may be using incorrect syntax.
Additionally, I have attempted to modify the .coot-preferences file, but I
haven't found a persistent solution for setting the EM map radius automatically
when the map is loaded.
Could you please provide any guidance on:
The correct Scheme function, if available, to set the EM map radius
programmatically.
A possible method for automating this process in the future (such as
setting it through an initialization script or preference).
If this functionality is not currently available in the Scheme interface, would
it be possible for it to be considered for a future Coot update?
Thank you very much for your time and assistance. I look forward to your
response.
Best regards,
Jean-Marc
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