Hi Coot community, I've wound up with nucleic acid chains that have a mix of A, C, G, DT, and I'd like to change the A, C, G to DA, DC, DG.
But: Simple Mutate only offers the same A, C, G ribonucleotides, not deoxy types. Scheme scripting with a command of the form (mutate-nucleotide-range imol chain-id resno-start resno-end sequence), such as (mutate-nucleotide-range 0 "A" 1 5 DGDCDADTDC) returns the error that the string length must match the number of residues, so I'm not sure how to encode the "deoxy" part of the identifier. How would you go about changing RNA to DNA? Thanks! -- Dan Richman, PhD (he/him/his) Research Associate, James Berger Lab Dept of Biophysics and Biophysical Chemistry Johns Hopkins University School of Medicine mobile: 201-669-0967 ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
