I agree with Eleanor. Based on the plot you sent I don't see a problem.
You don't have any outrageous residues, only a few slightly over the line.
Dale Tronrud
On 4/14/2025 4:11 AM, Eleanor Dodson wrote:
Possibly not all residues SHOULD be in the most favoured regions - local
contacts and crystal contacts can distort geometry ..
Eleanor
On Mon, 14 Apr 2025 at 11:59, 张馨丹 <2022324060...@stu.scu.edu.cn
<mailto:2022324060...@stu.scu.edu.cn>> wrote:
Dear Coot Subscribers Forum
I hope this message finds you well.
I am currently working on refining a protein structure using
Coot and aim to achieve 100% residues in the "In Favoured
Regions" of the Ramachandran Plot. While there is no outlier, some
residues still fall outside these regions.I can't find a way to
increase the percentage of "favoured" any further. I hope to get
your help.
Thank you!
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