On 24/05/2026 02:17, Georg Mlynek wrote:

Dear Paul, many thanks. It works now. However in my case the difference between the  reference and symmetry related chain is not strong.

You mean the colour thereof?

Changes in bot these lines have no effect

        coot.set_symmetry_colour(0.4, 0.4, 0.4)

Oh, yes - haha, not updated since olden graphics.

Noted.

        coot.set_default_bond_thickness(2)

This sets the bond width (thickness) for the next time you generate bonds - e.g. reading a pdb file.

The documentation could do with an overhaul.

coot.set_bond_thickness(imol, w)

is the one that you want.


Paul.





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