For the command line, do a clean before compile I.e $ mvn clean compile Sent from my iPhone
On Jan 10, 2013, at 5:42 PM, "Tim Miller" <[email protected]> wrote: > I'm having some trouble with this issue on trunk using eclipse. When I try to > run the default pipeline in the cvd it can't find the rxnorm_index: > > Caused by: java.io.FileNotFoundException: > org/apache/ctakes/dictionary/lookup/rxnorm_index > at > > org.apache.ctakes.core.resource.FileLocator.locateExplicitly(FileLocator.java:69) > at > org.apache.ctakes.core.resource.FileLocator.locateFile(FileLocator.java:44) > at > > org.apache.ctakes.core.resource.LuceneIndexReaderResourceImpl.load(LuceneIndexReaderResourceImpl.java:58) > ... 59 more > > When I try to compile from the command line it says: > > [INFO] > ------------------------------------------------------------------------ > [INFO] Building Apache cTAKES dictionary lookup > 3.1.0-incubating-SNAPSHOT > [INFO] > ------------------------------------------------------------------------ > [INFO] > [INFO] --- maven-remote-resources-plugin:1.3:process (default) @ > ctakes-dictionary-lookup --- > [INFO] > [INFO] --- maven-resources-plugin:2.5:resources (default-resources) > @ ctakes-dictionary-lookup --- > [debug] execute contextualize > [INFO] Using 'UTF-8' encoding to copy filtered resources. > [INFO] Copying 54 resources > [INFO] Copying 3 resources > [INFO] > [INFO] --- maven-dependency-plugin:2.6:unpack-dependencies > (unpack-dependencies) @ ctakes-dictionary-lookup --- > [INFO] ctakes-resources-umls2011ab-3.1.0.jar already exists in > destination. > [INFO] > [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ > ctakes-dictionary-lookup --- > [INFO] Nothing to compile - all classes are up to date > [INFO] > > > -- so it says the resources are there, and I can see the downloaded jar in my > .m2 directory, but they're not being unpacked for some reason (they are not > in target/classes/.../ of dictionary-lookup as I think they are supposed to > be). Anyone else with this problem? Any idea what's going on? > Tim > > > On 01/09/2013 05:20 PM, Karthik Sarma wrote: >> I was able to check out the 3.0.0 branch and build + run it without >> trouble. Will give the trunk another try >> >> >> >> >> >> -- >> Karthik Sarma >> UCLA Medical Scientist Training Program Class of 20?? >> Member, UCLA Medical Imaging & Informatics Lab >> Member, CA Delegation to the House of Delegates of the American Medical >> Association >> [email protected] >> gchat: [email protected] >> linkedin: www.linkedin.com/in/ksarma >> >> >> On Wed, Jan 9, 2013 at 1:46 PM, Masanz, James J. >> <[email protected]>wrote: >> >>> I did not get this error when I used eclipse's miport feature with maven >>> from SCM. >>> Everything built fine (The second time I tried a build) >>> Note, I did a Maven->Update project... from within eclipse between the two >>> builds. >>> >>> -- James >>> >>> >>>> -----Original Message----- >>>> From: [email protected] [mailto:[email protected]] On Behalf Of Karthik >>>> Sarma >>>> Sent: Tuesday, January 08, 2013 6:30 PM >>>> To: cTAKES Developer List >>>> Subject: Failure on unpack-dependencies? >>>> >>>> Hi folks, >>>> >>>> I was trying to get the trunk up and running on a new windows 8 machine >>>> (completely clean). Installed jdk, eclipse (classic/juno), m2e, and >>>> subversive. I used eclipse's import feature with maven from SCM. Checkout >>>> was fine, but ctakes-dictionary-lookup was not able to build (as far as I >>>> could tell, everything else built just fine. Here is the error: >>>> >>>> Execution unpack-dependencies of goal >>>> org.apache.maven.plugins:maven-dependency-plugin:2.6:unpack-dependencies >>>> failed: Plugin org.apache.maven.plugins:maven-dependency-plugin:2.6 or >>> one >>>> of its dependencies could not be resolved: Failed to collect dependencies >>>> for org.apache.maven.plugins:maven-dependency-plugin:jar:2.6 () >>>> (org.apache.maven.plugins:maven-dependency-plugin:2.6:unpack- >>>> dependencies:unpack-dependencies:process-resources) >>>> pom.xml /ctakes-dictionary-lookup line 82 >>>> >>>> I did a few checks to try to diagnose the issue -- the pom seems to be >>>> correct, and the m2e fix for unpack also seems to be correct. The plugin >>>> itself (for umls) exists in my local repository, as does >>> maven-dependency- >>>> plugin 2.6. There aren't any spaces or other oddities in any of the >>> paths. >>>> I tried cleaning, re-acquiring the source, and even deleting eclipse and >>>> starting from scratch, but alas, no dice. >>>> >>>> Is anyone else having a similar issue? Jenkins says everything should be >>>> working fine. I should probably just try building without involving >>>> eclipse at all, which I will do next. >>>> >>>> >>>> Karthik >>>> >>>> >>>> -- >>>> Karthik Sarma >>>> UCLA Medical Scientist Training Program Class of 20?? >>>> Member, UCLA Medical Imaging & Informatics Lab Member, CA Delegation to >>>> the House of Delegates of the American Medical Association >>>> [email protected] >>>> gchat: [email protected] >>>> linkedin: www.linkedin.com/in/ksarma >
