Author: mes
Date: 2009-12-15 17:22:34 -0800 (Tue, 15 Dec 2009)
New Revision: 18778
Added:
cytoscape/trunk/tests/cytoscape/visual/VisualMappingManagerTest.java
Log:
added a new unit test
Added: cytoscape/trunk/tests/cytoscape/visual/VisualMappingManagerTest.java
===================================================================
--- cytoscape/trunk/tests/cytoscape/visual/VisualMappingManagerTest.java
(rev 0)
+++ cytoscape/trunk/tests/cytoscape/visual/VisualMappingManagerTest.java
2009-12-16 01:22:34 UTC (rev 18778)
@@ -0,0 +1,174 @@
+/*
+ File: VisualMappingManagerTest.java
+
+ Copyright (c) 2006, The Cytoscape Consortium (www.cytoscape.org)
+
+ The Cytoscape Consortium is:
+ - Institute for Systems Biology
+ - University of California San Diego
+ - Memorial Sloan-Kettering Cancer Center
+ - Institut Pasteur
+ - Agilent Technologies
+
+ This library is free software; you can redistribute it and/or modify it
+ under the terms of the GNU Lesser General Public License as published
+ by the Free Software Foundation; either version 2.1 of the License, or
+ any later version.
+
+ This library is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY, WITHOUT EVEN THE IMPLIED WARRANTY OF
+ MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. The software and
+ documentation provided hereunder is on an "as is" basis, and the
+ Institute for Systems Biology and the Whitehead Institute
+ have no obligations to provide maintenance, support,
+ updates, enhancements or modifications. In no event shall the
+ Institute for Systems Biology and the Whitehead Institute
+ be liable to any party for direct, indirect, special,
+ incidental or consequential damages, including lost profits, arising
+ out of the use of this software and its documentation, even if the
+ Institute for Systems Biology and the Whitehead Institute
+ have been advised of the possibility of such damage. See
+ the GNU Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public License
+ along with this library; if not, write to the Free Software Foundation,
+ Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
+ */
+
+// VisualMappingManagerTest.java
+//----------------------------------------------------------------------------
+// $Revision: 18686 $
+// $Date: 2009-12-07 13:56:52 -0800 (Mon, 07 Dec 2009) $
+// $Author: mes $
+//----------------------------------------------------------------------------
+package cytoscape.visual;
+
+import giny.model.Node;
+import giny.model.RootGraph;
+import giny.view.NodeView;
+
+import java.awt.Color;
+import java.awt.Font;
+import java.io.FileReader;
+import java.util.Properties;
+
+import junit.framework.TestCase;
+import junit.framework.TestSuite;
+import cytoscape.CyEdge;
+import cytoscape.CyNetwork;
+import cytoscape.CyNode;
+import cytoscape.Cytoscape;
+import cytoscape.view.CyNetworkView;
+import cytoscape.data.CyAttributes;
+import cytoscape.data.Semantics;
+import cytoscape.data.readers.CyAttributesReader;
+import cytoscape.util.FileUtil;
+import static cytoscape.visual.VisualPropertyType.*;
+
+/**
+ *
+ */
+public class VisualMappingManagerTest extends TestCase {
+ CyNetwork cyNet;
+ CyNode a;
+ CyNode b;
+ CyNode c;
+ CyEdge ab;
+ CalculatorCatalog catalog;
+ Properties props;
+
+ /**
+ * Creates a new VisualMappingManagerTest object.
+ *
+ * @param name
+ * DOCUMENT ME!
+ */
+ public VisualMappingManagerTest(String name) {
+ super(name);
+ }
+
+ /**
+ * DOCUMENT ME!
+ */
+ public void setUp() {
+ System.out.println("setup begin");
+ cyNet = Cytoscape.createNetworkFromFile("testData/small.sif");
+ a = Cytoscape.getCyNode("a");
+ b = Cytoscape.getCyNode("b");
+ c = Cytoscape.getCyNode("c");
+ ab = Cytoscape.getCyEdge(a, b, Semantics.INTERACTION, "pp",
false);
+ props = new Properties();
+
+ try {
+
CyAttributesReader.loadAttributes(Cytoscape.getNodeAttributes(),
+ new
FileReader("testData/small.nodeAttr"));
+
props.load(FileUtil.getInputStream("testData/small.vizmap.props"));
+ } catch (Exception e) {
+ e.printStackTrace();
+ }
+
+ catalog = new CalculatorCatalog();
+ CalculatorIO.loadCalculators(props, catalog, true);
+ System.out.println("setup end");
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @throws Exception
+ * DOCUMENT ME!
+ */
+ public void testBypass() throws Exception {
+ Color fillColor = new Color(63, 128, 255);
+ Color borderColor = new Color(100, 100, 50);
+ NodeShape shape = NodeShape.DIAMOND;
+ double width = 49.0;
+ double height = 79.0;
+ String label = "testLabel";
+ String toolTip = "testToolTip";
+ Font font = new Font("SansSerif", Font.ITALIC, 10);
+ String fontString = "SansSerif,italic,10";
+
+ RootGraph graph = Cytoscape.getRootGraph();
+ int index1 = graph.createNode();
+ Node first = graph.getNode(index1);
+ int index2 = graph.createNode();
+ Node second = graph.getNode(index2);
+
+ CyNetwork network2 =
Cytoscape.createNetwork(Cytoscape.getRootGraph()
+ .getNodeIndicesArray(), Cytoscape.getRootGraph()
+ .getEdgeIndicesArray(), null);
+
+ CyAttributes secondNodeAttr = Cytoscape.getNodeAttributes();
+ String secondName = second.getIdentifier();
+ secondNodeAttr.setAttribute(secondName, "node.fillColor",
"63,128,255");
+ secondNodeAttr.setAttribute(secondName, "node.borderColor",
"100,100,50");
+ secondNodeAttr.setAttribute(secondName, "node.size", "32.0");
+
+ CyNetworkView view = Cytoscape.getNetworkView(
network2.getIdentifier() );
+ NodeView nv = view.getNodeView(index2);
+
+ VisualMappingManager vmm = Cytoscape.getVisualMappingManager();
+ vmm.setNetworkView(view);
+ vmm.setVisualStyle(view.getVisualStyle());
+
+ vmm.vizmapNode(nv,view);
+
+ assertEquals(fillColor, nv.getUnselectedPaint());
+ assertEquals(borderColor, nv.getBorderPaint());
+ // node size locked
+ assertEquals(32.0, nv.getWidth());
+ assertEquals(32.0, nv.getHeight());
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @param args
+ * DOCUMENT ME!
+ */
+ public static void main(String[] args) {
+ junit.textui.TestRunner.run(new TestSuite(
+ VisualMappingManagerTest.class));
+ }
+}
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