Author: pwang
Date: 2010-11-03 16:08:51 -0700 (Wed, 03 Nov 2010)
New Revision: 22704
Modified:
csplugins/trunk/ucsd/ruschein/PanGIA/src/org/idekerlab/PanGIAPlugin/VisualStyleObserver.java
Log:
Fix VS recover problem
Modified:
csplugins/trunk/ucsd/ruschein/PanGIA/src/org/idekerlab/PanGIAPlugin/VisualStyleObserver.java
===================================================================
---
csplugins/trunk/ucsd/ruschein/PanGIA/src/org/idekerlab/PanGIAPlugin/VisualStyleObserver.java
2010-11-03 22:39:38 UTC (rev 22703)
+++
csplugins/trunk/ucsd/ruschein/PanGIA/src/org/idekerlab/PanGIAPlugin/VisualStyleObserver.java
2010-11-03 23:08:51 UTC (rev 22704)
@@ -130,21 +130,30 @@
EdgeAppearanceCalculator eac =
style.getEdgeAppearanceCalculator();
- ContinuousMapping cm = new
ContinuousMapping(0.0, ObjectMapping.EDGE_MAPPING);
-
cm.setControllingAttributeName(NestedNetworkCreator.EDGE_SCORE,
view.getNetwork(), true);
- cm.addPoint(min, new
BoundaryRangeValues(30,30,30));
- cm.addPoint(max, new
BoundaryRangeValues(255,255,255));
- Calculator edgeCalc = new
BasicCalculator(VS_OVERVIEW_NAME+"-EdgeOpacityMapping", cm,
VisualPropertyType.EDGE_OPACITY);
- eac.setCalculator(edgeCalc);
+ // Set EDGE_OPACITY
+ BasicCalculator cal = (BasicCalculator)
eac.getCalculator(VisualPropertyType.EDGE_OPACITY);
+ if (cal.getMapping(0) instanceof
ContinuousMapping){
+
+ ContinuousMapping c_m =
(ContinuousMapping)cal.getMapping(0);
+ if
(c_m.getControllingAttributeName().equalsIgnoreCase(NestedNetworkCreator.EDGE_SCORE)){
+ c_m.addPoint(min, new
BoundaryRangeValues(30,30,30));
+ c_m.addPoint(max, new
BoundaryRangeValues(255,255,255));
+ }
+
+ }
- cm = new ContinuousMapping(0.0,
ObjectMapping.EDGE_MAPPING);
-
cm.setControllingAttributeName(NestedNetworkCreator.EDGE_SCORE,
view.getNetwork(), true);
- cm.addPoint(min, new
BoundaryRangeValues(5,5,5));
- cm.addPoint(max, new
BoundaryRangeValues(20,20,20));
- edgeCalc = new
BasicCalculator(VS_OVERVIEW_NAME+"-EdgeWidthMapping", cm,
VisualPropertyType.EDGE_LINE_WIDTH);
- eac.setCalculator(edgeCalc);
-
-
+ //Set EDGE_LINE_WIDTH
+ cal = (BasicCalculator)
eac.getCalculator(VisualPropertyType.EDGE_LINE_WIDTH);
+ if (cal.getMapping(0) instanceof
ContinuousMapping){
+
+ ContinuousMapping c_m =
(ContinuousMapping)cal.getMapping(0);
+ if
(c_m.getControllingAttributeName().equalsIgnoreCase(NestedNetworkCreator.EDGE_SCORE)){
+ c_m.addPoint(min, new
BoundaryRangeValues(5,5,5));
+ c_m.addPoint(max, new
BoundaryRangeValues(20,20,20));
+ }
+
+ }
+
min = Float.MAX_VALUE;
max = Float.MIN_VALUE;
@@ -153,24 +162,32 @@
if (f<min) min = f;
if (f>max) max = f;
}
-
+
NodeAppearanceCalculator nac =
style.getNodeAppearanceCalculator();
- cm = new ContinuousMapping(0.0,
ObjectMapping.NODE_MAPPING);
-
cm.setControllingAttributeName(NestedNetworkCreator.GENE_COUNT_SQRT,
view.getNetwork(), true);
- cm.addPoint(min, new
BoundaryRangeValues(20,20,20));
- double fs = Math.max(10*max,20);
- cm.addPoint(max, new
BoundaryRangeValues(fs,fs,fs));
- Calculator nodeCalc = new
BasicCalculator(VS_OVERVIEW_NAME+"-NodeSizeMapping", cm,
VisualPropertyType.NODE_SIZE);
- nac.setCalculator(nodeCalc);
+ // Set Node Size
+ cal = (BasicCalculator)
nac.getCalculator(VisualPropertyType.NODE_SIZE);
+ if (cal.getMapping(0) instanceof
ContinuousMapping){
+ ContinuousMapping c_m =
(ContinuousMapping)cal.getMapping(0);
+ if
(c_m.getControllingAttributeName().equalsIgnoreCase(NestedNetworkCreator.GENE_COUNT_SQRT)){
+ c_m.addPoint(min, new
BoundaryRangeValues(20,20,20));
+
+ double fs = Math.max(10*max,20);
+ c_m.addPoint(max, new
BoundaryRangeValues(fs,fs,fs));
+ }
+ }
- cm = new ContinuousMapping(0.0,
ObjectMapping.NODE_MAPPING);
-
cm.setControllingAttributeName(NestedNetworkCreator.GENE_COUNT_SQRT,
view.getNetwork(), true);
- cm.addPoint(min, new
BoundaryRangeValues(10,10,10));
- fs = Math.max(max,10);
- cm.addPoint(max, new
BoundaryRangeValues(fs,fs,fs));
- nodeCalc = new
BasicCalculator(VS_OVERVIEW_NAME+"-NodeFontSizeMapping", cm,
VisualPropertyType.NODE_FONT_SIZE);
- nac.setCalculator(nodeCalc);
+ //Set NODE_FONT_SIZE
+ cal = (BasicCalculator)
nac.getCalculator(VisualPropertyType.NODE_FONT_SIZE);
+ if (cal.getMapping(0) instanceof
ContinuousMapping){
+ ContinuousMapping c_m =
(ContinuousMapping)cal.getMapping(0);
+ if
(c_m.getControllingAttributeName().equalsIgnoreCase(NestedNetworkCreator.GENE_COUNT_SQRT)){
+ c_m.addPoint(min, new
BoundaryRangeValues(10,10,10));
+ double fs = Math.max(max,10);
+ c_m.addPoint(max, new
BoundaryRangeValues(fs,fs,fs));
+ }
+ }
+
}
view.setVisualStyle(style.getName());
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