Author: mes
Date: 2010-11-03 16:29:23 -0700 (Wed, 03 Nov 2010)
New Revision: 22705
Removed:
cytoscape3/trunk/psi.mi/
cytoscape3/trunk/sbml.reader/
Modified:
cytoscape3/trunk/configurations/services/org.ops4j.pax.logging.properties
cytoscape3/trunk/pom.xml
cytoscape3/trunk/provision/pom.xml
Log:
other implementations have been provided for sbml and psi-mi
Modified:
cytoscape3/trunk/configurations/services/org.ops4j.pax.logging.properties
===================================================================
--- cytoscape3/trunk/configurations/services/org.ops4j.pax.logging.properties
2010-11-03 23:08:51 UTC (rev 22704)
+++ cytoscape3/trunk/configurations/services/org.ops4j.pax.logging.properties
2010-11-03 23:29:23 UTC (rev 22705)
@@ -26,7 +26,7 @@
log4j.appender.stdout=org.apache.log4j.ConsoleAppender
log4j.appender.stdout.layout.ConversionPattern=%t %p [%c] - %m%n
log4j.appender.stdout.layout=org.apache.log4j.PatternLayout
-log4j.appender.stdout.threshold=INFO
+log4j.appender.stdout.threshold=DEBUG
log4j.logger.java=NONE,file
Modified: cytoscape3/trunk/pom.xml
===================================================================
--- cytoscape3/trunk/pom.xml 2010-11-03 23:08:51 UTC (rev 22704)
+++ cytoscape3/trunk/pom.xml 2010-11-03 23:29:23 UTC (rev 22705)
@@ -332,11 +332,11 @@
<module>webservice</module> <module>vizmap-gui</module>
<module>cpath</module>
<module>merge</module> <module>math.xform</module>
- <module>psi.mi</module> <module>biopax</module>
+ <module>biopax</module>
<module>editor</module>
<module>attribute.browser</module>
<module>cpath2</module>
<module>filters.old</module> <module>filters</module>
- <module>sbml.reader</module>
<module>manual.layout</module>
+ <module>manual.layout</module>
<module>ontology</module>
-->
Modified: cytoscape3/trunk/provision/pom.xml
===================================================================
--- cytoscape3/trunk/provision/pom.xml 2010-11-03 23:08:51 UTC (rev 22704)
+++ cytoscape3/trunk/provision/pom.xml 2010-11-03 23:29:23 UTC (rev 22705)
@@ -151,7 +151,7 @@
<dependency>
<groupId>org.cytoscape</groupId>
<artifactId>work-spring-hack</artifactId>
- <version>1.0-SNAPSHOT</version>
+ <version>3.0.0-alpha1</version>
</dependency>
<dependency>
<groupId>org.cytoscape</groupId>
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