See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/1190/>
------------------------------------------
[...truncated 180 lines...]
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Running integration.ITSpringIntegration
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.407 sec
Results :
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0
[WARNING] File encoding has not been set, using platform encoding UTF-8, i.e.
build is platform dependent!
[INFO] [failsafe:verify {execution: verify}]
[INFO] Failsafe report directory:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/failsafe-reports>
[WARNING] File encoding has not been set, using platform encoding UTF-8, i.e.
build is platform dependent!
[INFO] [install:install]
[INFO] Installing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT.jar>
to
/home/bturner/.m2/repository/org/cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT.jar
[INFO] Installing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar>
to
/home/bturner/.m2/repository/org/cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar
[INFO] Installing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar>
to
/home/bturner/.m2/repository/org/cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar
[INFO] Installing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar>
to
/home/bturner/.m2/repository/org/cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar
[INFO] [bundle:install]
[INFO] Parsing file:/home/bturner/.m2/repository/repository.xml
[Fatal Error] repository.xml:3:1: Premature end of file.
org.xml.sax.SAXParseException: Premature end of file.
at
com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:249)
at
com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:284)
at javax.xml.parsers.DocumentBuilder.parse(DocumentBuilder.java:208)
at org.apache.felix.obrplugin.ObrUpdate.parseFile(ObrUpdate.java:347)
at
org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:324)
at org.apache.felix.obrplugin.ObrInstall.execute(ObrInstall.java:140)
at
org.apache.maven.plugin.DefaultPluginManager.executeMojo(DefaultPluginManager.java:483)
at
hudson.maven.agent.PluginManagerInterceptor.executeMojo(PluginManagerInterceptor.java:182)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoals(DefaultLifecycleExecutor.java:678)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalWithLifecycle(DefaultLifecycleExecutor.java:540)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoal(DefaultLifecycleExecutor.java:519)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalAndHandleFailures(DefaultLifecycleExecutor.java:371)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeTaskSegments(DefaultLifecycleExecutor.java:332)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.execute(DefaultLifecycleExecutor.java:181)
at
org.apache.maven.lifecycle.LifecycleExecutorInterceptor.execute(LifecycleExecutorInterceptor.java:65)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:356)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:137)
at org.apache.maven.cli.MavenCli.main(MavenCli.java:356)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.codehaus.classworlds.Launcher.launchEnhanced(Launcher.java:315)
at org.codehaus.classworlds.Launcher.launch(Launcher.java:255)
at hudson.maven.agent.Main.launch(Main.java:165)
at hudson.maven.MavenBuilder.call(MavenBuilder.java:165)
at
hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:708)
at
hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:652)
at hudson.remoting.UserRequest.perform(UserRequest.java:114)
at hudson.remoting.UserRequest.perform(UserRequest.java:48)
at hudson.remoting.Request$2.run(Request.java:270)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
at java.util.concurrent.FutureTask.run(FutureTask.java:138)
at
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:619)
[INFO] Writing OBR metadata
[INFO] [deploy:deploy]
[INFO] Retrieving previous build number from snapshots
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/pom.xml>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-10_21-24-33/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/pom.xml
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-10_21-24-33/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-10_21-24-33/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-10_21-24-33/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-10_21-24-33/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Error retrieving previous build number for artifact
'org.cytoscape:model-impl:bundle': repository metadata for: 'snapshot
org.cytoscape:model-impl:3.0.0-alpha2-SNAPSHOT' could not be retrieved from
repository: snapshots due to an error: GET request of:
org/cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/maven-metadata.xml.sha1 from
snapshots failed
No space left on device
[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 50 seconds
[INFO] Finished at: Wed Nov 10 21:25:26 EST 2010
[INFO] Final Memory: 75M/724M
[INFO] ------------------------------------------------------------------------
Sending e-mails to: [email protected]
channel stopped
[trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn
org.codehaus.sonar:sonar-maven-plugin:1.8:sonar
-Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar
-Dsonar.jdbc.password=deploysonar
-Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar
-Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true
[INFO] Scanning for projects...
WAGON_VERSION: 1.0-beta-2
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.model-impl
[INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar]
(aggregator-style)
[INFO] ------------------------------------------------------------------------
[INFO] [sonar:sonar]
[INFO] Sonar host: http://localhost:8021/sonar
[INFO] Sonar version: 2.2
[INFO] [sonar-core:internal]
[INFO] Database dialect class org.sonar.api.database.dialect.MySql
[INFO] ------------- Analyzing org.cytoscape.model-impl
[INFO] Selected quality profile : Cytoscape, language=java
[INFO] Configure maven plugins...
[INFO] Sensor JavaSourceImporter...
[INFO] Sensor JavaSourceImporter done: 510 ms
[INFO] Sensor AsynchronousMeasuresSensor...
[INFO] Sensor AsynchronousMeasuresSensor done: 197 ms
[INFO] Sensor SquidSensor...
[INFO] Java AST scan...
[INFO] Java AST scan done: 550 ms
[INFO] Java bytecode scan...
[INFO] Java bytecode scan done: 127 ms
[INFO] Squid extraction...
[INFO] Package design analysis...
[INFO] Package design analysis done: 9 ms
[INFO] Squid extraction done: 332 ms
[INFO] Sensor SquidSensor done: 1072 ms
[INFO] Sensor ProfileSensor...
[INFO] Sensor ProfileSensor done: 25 ms
[INFO] Sensor ProjectLinksSensor...
[INFO] Sensor ProjectLinksSensor done: 6 ms
[INFO] Sensor VersionEventsSensor...
[INFO] Sensor VersionEventsSensor done: 35 ms
[INFO] Sensor Maven dependencies...
[INFO] Sensor Maven dependencies done: 241 ms
[INFO] Execute maven plugin findbugs-maven-plugin...
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.model-impl
[INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs]
[INFO] ------------------------------------------------------------------------
[INFO] Preparing findbugs:findbugs
[INFO] [resources:resources]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 3 resources
[INFO] Copying 1 resource
[INFO] [pax:compile]
[INFO] Nothing to compile - all classes are up to date
[INFO] [findbugs:findbugs]
[INFO] Locale is en
[java] Warnings generated: 3
[INFO] Execute maven plugin findbugs-maven-plugin done: 15309 ms
[INFO] Sensor FindbugsSensor...
[INFO] Sensor FindbugsSensor done: 165 ms
[INFO] Sensor CheckstyleSensor...
[INFO] Execute Checkstyle 5.1...
[INFO] Checkstyle output report:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/checkstyle-result.xml>
[INFO] Checkstyle configuration:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/checkstyle.xml>
[INFO] Execute Checkstyle 5.1 done: 771 ms
[INFO] Sensor CheckstyleSensor done: 971 ms
[INFO] Sensor PmdSensor...
[INFO] Execute PMD 4.2.5...
[INFO] Java version: 1.6
[INFO] PMD configuration:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/pmd.xml>
[INFO] PMD output report:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/sonar/pmd-result.xml>
[INFO] Execute PMD 4.2.5 done: 3463 ms
[INFO] Sensor PmdSensor done: 3586 ms
[INFO] Execute maven plugin cobertura-maven-plugin...
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.model-impl
[INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura]
[INFO] ------------------------------------------------------------------------
[INFO] Preparing cobertura:cobertura
[INFO] [resources:resources]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 3 resources
[INFO] Copying 1 resource
[INFO] [pax:compile]
[INFO] Nothing to compile - all classes are up to date
[INFO] [cobertura:instrument]
[INFO] Cobertura 1.9.2 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file
Instrumenting 16 files to
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/generated-classes/cobertura>
Cobertura: Saved information on 16 classes.
Instrument time: 911ms
[INFO] Instrumentation was successful.
[INFO] [build-helper:add-test-source {execution: add-test-source}]
[INFO] Test Source directory:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/src/integration/java>
added.
[INFO] [resources:testResources]
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/src/test/resources>
[INFO] [pax:testCompile]
[INFO] Nothing to compile - all classes are up to date
[INFO] [surefire:test]
[INFO] Surefire report directory:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/surefire-reports>
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Running org.cytoscape.model.CyEdgeTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.166 sec
Running org.cytoscape.model.CyNodeTest
Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.211 sec
Running org.cytoscape.model.CyTableManagerTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 sec
Running org.cytoscape.model.TestCyNetworkFactory
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 sec
Running org.cytoscape.model.GraphObjectTest
Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.013 sec
Running org.cytoscape.model.subnetwork.CySubNetworkCyNetworkTest
Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.125 sec
Running org.cytoscape.model.IdentifiableTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 sec
Running org.cytoscape.model.CyTableTest
Tests run: 15, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.03 sec
Running org.cytoscape.model.subnetwork.CySubNetworkTest
Tests run: 14, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.074 sec
Running org.cytoscape.model.CyNetworkTest
Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.1 sec
Running org.cytoscape.model.subnetwork.CyRootNetworkCyNetworkTest
Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.065 sec
Running org.cytoscape.model.subnetwork.CyRootNetworkTest
Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.051 sec
Results :
Tests run: 163, Failures: 0, Errors: 0, Skipped: 0
[INFO] [cobertura:cobertura]
[INFO] Cobertura 1.9.2 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file
Cobertura: Loaded information on 16 classes.
Report time: 659ms
[INFO] Cobertura Report generation was successful.
[INFO] Execute maven plugin cobertura-maven-plugin done: 5971 ms
[INFO] Sensor CoberturaSensor...
[INFO] parsing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/site/cobertura/coverage.xml>
[INFO] Sensor CoberturaSensor done: 221 ms
[INFO] Sensor CpdSensor...
[INFO] Sensor CpdSensor done: 164 ms
[INFO] Execute maven plugin taglist-maven-plugin...
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.model-impl
[INFO] task-segment: [org.codehaus.mojo:taglist-maven-plugin:2.4:taglist]
[INFO] ------------------------------------------------------------------------
[WARNING] DEPRECATED [tags]: No reason given
[INFO] [taglist:taglist]
[WARNING] Using legacy tag format. This is not recommended.
[INFO] Execute maven plugin taglist-maven-plugin done: 1951 ms
[INFO] Sensor org.sonar.plugins.taglist.taglistsen...@3eea8847...
[INFO] Sensor org.sonar.plugins.taglist.taglistsen...@3eea8847 done: 68 ms
[INFO] Sensor SurefireSensor...
[INFO] parsing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/surefire-reports>
[INFO] Sensor SurefireSensor done: 100 ms
[INFO] Execute decorators...
[INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar/
[INFO] Database optimization...
[INFO] Database optimization done: 1895 ms
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESSFUL
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 41 seconds
[INFO] Finished at: Wed Nov 10 21:26:14 EST 2010
[INFO] Final Memory: 86M/719M
[INFO] ------------------------------------------------------------------------
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