See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/1191/>
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Running org.cytoscape.model.subnetwork.CySubNetworkCyNetworkTest
Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.055 sec
Running org.cytoscape.model.IdentifiableTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 sec
Running org.cytoscape.model.CyTableTest
Tests run: 15, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.02 sec
Running org.cytoscape.model.subnetwork.CySubNetworkTest
Tests run: 14, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.029 sec
Running org.cytoscape.model.CyNetworkTest
Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.037 sec
Running org.cytoscape.model.subnetwork.CyRootNetworkCyNetworkTest
Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.038 sec
Running org.cytoscape.model.subnetwork.CyRootNetworkTest
Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.024 sec
Results :
Tests run: 163, Failures: 0, Errors: 0, Skipped: 0
[HUDSON] Recording test results
[INFO] [bundle:bundle]
[WARNING] Warning building bundle
org.cytoscape:model-impl:bundle:3.0.0-alpha2-SNAPSHOT : Instructions for
Private-Package that are never used:
org\.cytoscape\.model\.internal\..*|org\.cytoscape\.model\.internal
[INFO] [javadoc:jar {execution: attach-javadocs}]
[ERROR] Error fetching link:
http://java.sun.com/javase/6/docs/api/package-list. Ignored it.
[ERROR] Error fetching link:
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Loading source files for package org.cytoscape.model.internal...
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3 warnings
[WARNING] Javadoc Warnings
[WARNING]
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[WARNING]
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[WARNING]
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[INFO] Building jar:
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[INFO] Preparing source:jar
[WARNING] Removing: jar from forked lifecycle, to prevent recursive invocation.
[INFO] No goals needed for project - skipping
[INFO] [source:jar {execution: attach-sources}]
[INFO] Building jar:
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[INFO] Unable to find resource
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[INFO] Unable to find resource
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Downloading:
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[INFO] Unable to find resource
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(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/)
Downloading:
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[INFO] Unable to find resource
'org.springframework.osgi:log4j.osgi:jar:1.2.15-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
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[INFO] Unable to find resource
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Downloading:
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[INFO] Unable to find resource
'org.springframework.osgi:log4j.osgi:jar:1.2.15-SNAPSHOT' in repository
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(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/)
[INFO] [jar:test-jar {execution: default}]
[INFO] Building jar:
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Downloading:
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[INFO] Unable to find resource
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cytoscape_snapshots
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Downloading:
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[INFO] Unable to find resource
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cytoscape_biopax_snapshot
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Downloading:
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[INFO] Unable to find resource
'org.springframework.osgi:log4j.osgi:jar:1.2.15-SNAPSHOT' in repository
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(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/)
Downloading:
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[INFO] Unable to find resource
'org.springframework.osgi:log4j.osgi:jar:1.2.15-SNAPSHOT' in repository
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/)
Downloading:
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[INFO] Unable to find resource
'org.springframework.osgi:log4j.osgi:jar:1.2.15-SNAPSHOT' in repository
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/)
Downloading:
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[INFO] Unable to find resource
'org.springframework.osgi:log4j.osgi:jar:1.2.15-SNAPSHOT' in repository
spring-osgi-snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/)
[INFO] [failsafe:integration-test {execution: integration-test}]
[INFO] Failsafe report directory:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/failsafe-reports>
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Running integration.ITSpringIntegration
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.25 sec
Results :
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0
[WARNING] File encoding has not been set, using platform encoding UTF-8, i.e.
build is platform dependent!
[INFO] [failsafe:verify {execution: verify}]
[INFO] Failsafe report directory:
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/failsafe-reports>
[WARNING] File encoding has not been set, using platform encoding UTF-8, i.e.
build is platform dependent!
[INFO] [install:install]
[INFO] Installing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT.jar>
to
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[INFO] Installing
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to
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[INFO] Installing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar>
to
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[INFO] Installing
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar>
to
/home/bturner/.m2/repository/org/cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar
[INFO] [bundle:install]
[INFO] Parsing file:/home/bturner/.m2/repository/repository.xml
[Fatal Error] repository.xml:3:1: Premature end of file.
org.xml.sax.SAXParseException: Premature end of file.
at
com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:249)
at
com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:284)
at javax.xml.parsers.DocumentBuilder.parse(DocumentBuilder.java:208)
at org.apache.felix.obrplugin.ObrUpdate.parseFile(ObrUpdate.java:347)
at
org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:324)
at org.apache.felix.obrplugin.ObrInstall.execute(ObrInstall.java:140)
at
org.apache.maven.plugin.DefaultPluginManager.executeMojo(DefaultPluginManager.java:483)
at
hudson.maven.agent.PluginManagerInterceptor.executeMojo(PluginManagerInterceptor.java:182)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoals(DefaultLifecycleExecutor.java:678)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalWithLifecycle(DefaultLifecycleExecutor.java:540)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoal(DefaultLifecycleExecutor.java:519)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeGoalAndHandleFailures(DefaultLifecycleExecutor.java:371)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.executeTaskSegments(DefaultLifecycleExecutor.java:332)
at
org.apache.maven.lifecycle.DefaultLifecycleExecutor.execute(DefaultLifecycleExecutor.java:181)
at
org.apache.maven.lifecycle.LifecycleExecutorInterceptor.execute(LifecycleExecutorInterceptor.java:65)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:356)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:137)
at org.apache.maven.cli.MavenCli.main(MavenCli.java:356)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.codehaus.classworlds.Launcher.launchEnhanced(Launcher.java:315)
at org.codehaus.classworlds.Launcher.launch(Launcher.java:255)
at hudson.maven.agent.Main.launch(Main.java:165)
at hudson.maven.MavenBuilder.call(MavenBuilder.java:165)
at
hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:708)
at
hudson.maven.MavenModuleSetBuild$Builder.call(MavenModuleSetBuild.java:652)
at hudson.remoting.UserRequest.perform(UserRequest.java:114)
at hudson.remoting.UserRequest.perform(UserRequest.java:48)
at hudson.remoting.Request$2.run(Request.java:270)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
at java.util.concurrent.FutureTask.run(FutureTask.java:138)
at
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:619)
[INFO] Writing OBR metadata
[INFO] [deploy:deploy]
[INFO] Retrieving previous build number from snapshots
[INFO] repository metadata for: 'snapshot
org.cytoscape:model-impl:3.0.0-alpha2-SNAPSHOT' could not be found on
repository: snapshots, so will be created
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/pom.xml>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-11_20-17-37/archive/org.cytoscape/model-impl/3.0.0-alpha2-SNAPSHOT/pom.xml
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-11_20-17-37/archive/org.cytoscape/model-impl/3.0.0-alpha2-20101112.011843-1/model-impl-3.0.0-alpha2-SNAPSHOT.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-11_20-17-37/archive/org.cytoscape/model-impl/3.0.0-alpha2-20101112.011843-1/model-impl-3.0.0-alpha2-SNAPSHOT-javadoc.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-11_20-17-37/archive/org.cytoscape/model-impl/3.0.0-alpha2-20101112.011843-1/model-impl-3.0.0-alpha2-SNAPSHOT-sources.jar
[HUDSON] Archiving
<http://cytoscape.wodaklab.org/hudson/job/Cy3%20Model%20impl/ws/trunk/target/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar>
to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Model
impl/modules/org.cytoscape$model-impl/builds/2010-11-11_20-17-37/archive/org.cytoscape/model-impl/3.0.0-alpha2-20101112.011843-1/model-impl-3.0.0-alpha2-SNAPSHOT-tests.jar
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Error deploying artifact: No space left on device
[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 1 minute 4 seconds
[INFO] Finished at: Thu Nov 11 20:18:44 EST 2010
[INFO] Final Memory: 75M/724M
[INFO] ------------------------------------------------------------------------
Sending e-mails to: [email protected]
channel stopped
[trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn
org.codehaus.sonar:sonar-maven-plugin:1.8:sonar
-Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar
-Dsonar.jdbc.password=deploysonar
-Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar
-Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true
[INFO] Scanning for projects...
WAGON_VERSION: 1.0-beta-2
[INFO] ------------------------------------------------------------------------
[INFO] Building org.cytoscape.model-impl
[INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar]
(aggregator-style)
[INFO] ------------------------------------------------------------------------
[INFO] [sonar:sonar]
[INFO] Sonar host: http://localhost:8021/sonar
[INFO] Sonar version: 2.2
Downloading:
http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
1863/511b
[WARNING] Unable to get resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' from
repository sonar (http://localhost:8021/sonar/deploy/maven): GET request of:
org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
from sonar failed
Downloading:
http://download.java.net/maven/2/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository maven2-repository.dev.java.net (http://download.java.net/maven/2)
Downloading:
http://download.java.net/maven/1/org.codehaus.sonar.runtime/poms/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository maven-repository.dev.java.net (http://download.java.net/maven/1)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository central (http://repo1.maven.org/maven2)
Downloading:
http://localhost:8021/sonar/deploy/maven/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
3726/511b
[WARNING] Unable to get resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' from
repository sonar (http://localhost:8021/sonar/deploy/maven): GET request of:
org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
from sonar failed
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/releases//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository cytoscape_releases
(http://cytoscape.wodaklab.org/nexus/content/repositories/releases/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository cytoscape_thirdparty
(http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository cytoscape_biopax_release
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository ops4j-release
(http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository l2fprod-release
(http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi//org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository spring-osgi
(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi/)
Downloading:
http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/sonar/runtime/sonar-core-maven-plugin/20101111010113/sonar-core-maven-plugin-20101111010113.pom
[INFO] Unable to find resource
'org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113' in
repository central (http://repo1.maven.org/maven2)
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] Can not execute Sonar
Embedded error: Unable to build project for plugin
'org.codehaus.sonar.runtime:sonar-core-maven-plugin': POM
'org.codehaus.sonar.runtime:sonar-core-maven-plugin' not found in repository:
Unable to download the artifact from any repository
org.codehaus.sonar.runtime:sonar-core-maven-plugin:pom:20101111010113
from the specified remote repositories:
cytoscape_releases
(http://cytoscape.wodaklab.org/nexus/content/repositories/releases/),
cytoscape_biopax_snapshot
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/),
cytoscape_thirdparty
(http://cytoscape.wodaklab.org/nexus/content/repositories/thirdparty/),
cytoscape_snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/),
maven2-repository.dev.java.net (http://download.java.net/maven/2),
l2fprod-release
(http://cytoscape.wodaklab.org/nexus/content/repositories/l2fprod-release/),
sonar (http://localhost:8021/sonar/deploy/maven),
cytoscape_biopax_release
(http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-release/),
ops4j-release
(http://cytoscape.wodaklab.org/nexus/content/repositories/ops4j-release/),
spring-osgi-snapshots
(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/),
Nexus (http://cytoscape.wodaklab.org/nexus/content/groups/public),
maven-repository.dev.java.net (http://download.java.net/maven/1),
spring-osgi
(http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi/)
for project org.codehaus.sonar.runtime:sonar-core-maven-plugin
[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 7 seconds
[INFO] Finished at: Thu Nov 11 20:19:03 EST 2010
[INFO] Final Memory: 11M/213M
[INFO] ------------------------------------------------------------------------
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