See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/109/>
------------------------------------------ [...truncated 432 lines...] [INFO] Unable to find resource 'org.codehaus.plexus:plexus-archiver:jar:1.0-alpha-12' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/plexus/plexus-archiver/1.0-alpha-12/plexus-archiver-1.0-alpha-12.jar [INFO] Unable to find resource 'org.apache.maven.shared:file-management:jar:1.1' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/apache/maven/shared/file-management/1.1/file-management-1.1.jar 172K downloaded (plexus-archiver-1.0-alpha-12.jar) 30K downloaded (file-management-1.1.jar) Downloading: http://download.java.net/maven/2/org/codehaus/plexus/plexus-interpolation/1.7/plexus-interpolation-1.7.jar Downloading: http://download.java.net/maven/2/org/apache/maven/shared/maven-repository-builder/1.0-alpha-2/maven-repository-builder-1.0-alpha-2.jar [INFO] Unable to find resource 'org.codehaus.plexus:plexus-interpolation:jar:1.7' in repository maven2-repository.dev.java.net (http://download.java.net/maven/2) Downloading: http://download.java.net/maven/1/org.codehaus.plexus/jars/plexus-interpolation-1.7.jar [INFO] Unable to find resource 'org.apache.maven.shared:maven-repository-builder:jar:1.0-alpha-2' in repository maven2-repository.dev.java.net (http://download.java.net/maven/2) Downloading: http://download.java.net/maven/1/org.apache.maven.shared/jars/maven-repository-builder-1.0-alpha-2.jar [INFO] Unable to find resource 'org.codehaus.plexus:plexus-interpolation:jar:1.7' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/plexus/plexus-interpolation/1.7/plexus-interpolation-1.7.jar 49K downloaded (plexus-interpolation-1.7.jar) [INFO] Unable to find resource 'org.apache.maven.shared:maven-repository-builder:jar:1.0-alpha-2' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/apache/maven/shared/maven-repository-builder/1.0-alpha-2/maven-repository-builder-1.0-alpha-2.jar Downloading: http://download.java.net/maven/2/org/codehaus/plexus/plexus-io/1.0-alpha-4/plexus-io-1.0-alpha-4.jar 22K downloaded (maven-repository-builder-1.0-alpha-2.jar) [INFO] Unable to find resource 'org.codehaus.plexus:plexus-io:jar:1.0-alpha-4' in repository maven2-repository.dev.java.net (http://download.java.net/maven/2) Downloading: http://download.java.net/maven/1/org.codehaus.plexus/jars/plexus-io-1.0-alpha-4.jar [INFO] Unable to find resource 'org.codehaus.plexus:plexus-io:jar:1.0-alpha-4' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/plexus/plexus-io/1.0-alpha-4/plexus-io-1.0-alpha-4.jar 47K downloaded (plexus-io-1.0-alpha-4.jar) Downloading: http://download.java.net/maven/2/org/codehaus/plexus/plexus-active-collections/1.0-beta-2/plexus-active-collections-1.0-beta-2.jar [INFO] Unable to find resource 'org.codehaus.plexus:plexus-active-collections:jar:1.0-beta-2' in repository maven2-repository.dev.java.net (http://download.java.net/maven/2) Downloading: http://download.java.net/maven/1/org.codehaus.plexus/jars/plexus-active-collections-1.0-beta-2.jar [INFO] Unable to find resource 'org.codehaus.plexus:plexus-active-collections:jar:1.0-beta-2' in repository maven-repository.dev.java.net (http://download.java.net/maven/1) Downloading: http://cytoscape.wodaklab.org/nexus/content/groups/public/org/codehaus/plexus/plexus-active-collections/1.0-beta-2/plexus-active-collections-1.0-beta-2.jar 20K downloaded (plexus-active-collections-1.0-beta-2.jar) [INFO] [assembly:single {execution: make-assembly}] [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] org/cytoscape/view/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] org/cytoscape/view/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] org/ already added, skipping [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-jar-with-dependencies.jar> [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] org/cytoscape/view/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] org/cytoscape/view/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] META-INF/maven/org.cytoscape/ already added, skipping [INFO] org/ already added, skipping [INFO] org/cytoscape/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/maven/ already added, skipping [INFO] org/ already added, skipping [INFO] [jar:test-jar {execution: default}] [INFO] Building jar: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-tests.jar> [INFO] [install:install] [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT.jar> to /home/bturner/.m2/repository/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-SNAPSHOT.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-javadoc.jar> to /home/bturner/.m2/repository/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-SNAPSHOT-javadoc.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-sources.jar> to /home/bturner/.m2/repository/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-SNAPSHOT-sources.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-jar-with-dependencies.jar> to /home/bturner/.m2/repository/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-SNAPSHOT-jar-with-dependencies.jar [INFO] Installing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-tests.jar> to /home/bturner/.m2/repository/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-SNAPSHOT-tests.jar [INFO] [bundle:install] [INFO] Parsing file:/home/bturner/.m2/repository/repository.xml [INFO] Installing org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-SNAPSHOT.jar [INFO] Installing org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-SNAPSHOT-jar-with-dependencies.jar [INFO] Writing OBR metadata [INFO] [deploy:deploy] [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-20101114.012808-20.jar 4K uploaded (plugin-api-3.0.0-alpha2-20101114.012808-20.jar) [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'artifact org.cytoscape:plugin-api' [INFO] Retrieving previous metadata from snapshots [INFO] Uploading repository metadata for: 'snapshot org.cytoscape:plugin-api:3.0.0-alpha2-SNAPSHOT' [INFO] Uploading project information for plugin-api 3.0.0-alpha2-20101114.012808-20 [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-20101114.012808-20-javadoc.jar 27K uploaded (plugin-api-3.0.0-alpha2-20101114.012808-20-javadoc.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-20101114.012808-20-sources.jar 2K uploaded (plugin-api-3.0.0-alpha2-20101114.012808-20-sources.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-20101114.012808-20-jar-with-dependencies.jar 251K uploaded (plugin-api-3.0.0-alpha2-20101114.012808-20-jar-with-dependencies.jar) [INFO] Retrieving previous build number from snapshots Uploading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/org/cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/plugin-api-3.0.0-alpha2-20101114.012808-20-tests.jar 4K uploaded (plugin-api-3.0.0-alpha2-20101114.012808-20-tests.jar) [INFO] [bundle:deploy] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Plugin API/modules/org.cytoscape$plugin-api/builds/2010-11-13_20-26-02/archive/org.cytoscape/plugin-api/3.0.0-alpha2-SNAPSHOT/pom.xml [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Plugin API/modules/org.cytoscape$plugin-api/builds/2010-11-13_20-26-02/archive/org.cytoscape/plugin-api/3.0.0-alpha2-20101114.012808-20/plugin-api-3.0.0-alpha2-SNAPSHOT.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-javadoc.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Plugin API/modules/org.cytoscape$plugin-api/builds/2010-11-13_20-26-02/archive/org.cytoscape/plugin-api/3.0.0-alpha2-20101114.012808-20/plugin-api-3.0.0-alpha2-SNAPSHOT-javadoc.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-sources.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Plugin API/modules/org.cytoscape$plugin-api/builds/2010-11-13_20-26-02/archive/org.cytoscape/plugin-api/3.0.0-alpha2-20101114.012808-20/plugin-api-3.0.0-alpha2-SNAPSHOT-sources.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-jar-with-dependencies.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Plugin API/modules/org.cytoscape$plugin-api/builds/2010-11-13_20-26-02/archive/org.cytoscape/plugin-api/3.0.0-alpha2-20101114.012808-20/plugin-api-3.0.0-alpha2-SNAPSHOT-jar-with-dependencies.jar [HUDSON] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20Plugin%20API/ws/trunk/target/plugin-api-3.0.0-alpha2-SNAPSHOT-tests.jar> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 Plugin API/modules/org.cytoscape$plugin-api/builds/2010-11-13_20-26-02/archive/org.cytoscape/plugin-api/3.0.0-alpha2-20101114.012808-20/plugin-api-3.0.0-alpha2-SNAPSHOT-tests.jar [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 2 minutes 6 seconds [INFO] Finished at: Sat Nov 13 20:28:10 EST 2010 [INFO] Final Memory: 79M/720M [INFO] ------------------------------------------------------------------------ channel stopped [trunk] $ /R1/tools/maven/apache-maven-2.1.0/bin/mvn org.codehaus.sonar:sonar-maven-plugin:1.8:sonar -Dsonar.jdbc.driver=com.mysql.jdbc.Driver -Dsonar.jdbc.username=sonar -Dsonar.jdbc.password=deploysonar -Dsonar.jdbc.url=jdbc:mysql://localhost:3306/sonar -Dsonar.host.url=http://localhost:8021/sonar/ -Dsonar.skipInstall=true [INFO] Scanning for projects... WAGON_VERSION: 1.0-beta-2 [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.plugin-api [INFO] task-segment: [org.codehaus.sonar:sonar-maven-plugin:1.8:sonar] (aggregator-style) [INFO] ------------------------------------------------------------------------ [INFO] [sonar:sonar] [INFO] Sonar host: http://localhost:8021/sonar [INFO] Sonar version: 2.2 [INFO] [sonar-core:internal] [INFO] Database dialect class org.sonar.api.database.dialect.MySql [INFO] ------------- Analyzing org.cytoscape.plugin-api [INFO] Selected quality profile : Cytoscape, language=java [INFO] Configure maven plugins... [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 337 ms [INFO] Sensor AsynchronousMeasuresSensor... [INFO] Sensor AsynchronousMeasuresSensor done: 66 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 235 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 43 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 8 ms [INFO] Squid extraction done: 149 ms [INFO] Sensor SquidSensor done: 473 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 6 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 35 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 133 ms [INFO] Execute maven plugin findbugs-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.plugin-api [INFO] task-segment: [org.codehaus.mojo:findbugs-maven-plugin:2.3.1:findbugs] [INFO] ------------------------------------------------------------------------ [INFO] Preparing findbugs:findbugs [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute maven plugin The plugin 'org.codehaus.mojo:cobertura-maven-plugin' does not exist or no valid version could be found [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 8 seconds [INFO] Finished at: Sat Nov 13 20:28:19 EST 2010 [INFO] Final Memory: 51M/596M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
