See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/126/changes>
Changes: [mes] removed jaxb dep that's provided by java 1.6 ------------------------------------------ [...truncated 892 lines...] [INFO] Java AST scan... [INFO] Java AST scan done: 675 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 166 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 31 ms [INFO] Squid extraction done: 572 ms [INFO] Sensor SquidSensor done: 1487 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Findbugs output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/findbugs-result.xml> [INFO] Execute Findbugs 1.3.9 done: 10788 ms [INFO] Sensor FindbugsSensor done: 11025 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi] [INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura] [INFO] ------------------------------------------------------------------------ [INFO] Preparing cobertura:cobertura Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [jaxb2:xjc {execution: mi1}] [INFO] No changes detected in schema or binding files, skipping source generation. Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [jaxb2:xjc {execution: mi25}] [INFO] No changes detected in schema or binding files, skipping source generation. [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [pax:compile] [INFO] Nothing to compile - all classes are up to date [INFO] [cobertura:instrument] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Instrumenting 126 files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/generated-classes/cobertura> Cobertura: Saved information on 126 classes. Instrument time: 5068ms [INFO] Instrumentation was successful. [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 12 resources Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [pax:testCompile] [INFO] Nothing to compile - all classes are up to date Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [surefire:test] [INFO] Surefire report directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.cytoscape.psi_mi.internal.cyto_mapper.MapFromCytoscapeTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.716 sec Running org.cytoscape.psi_mi.internal.plugin.PsiMiNetworkViewReaderTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.648 sec Running org.cytoscape.psi_mi.internal.cyto_mapper.MapToCytoscapeTest Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.758 sec Running org.cytoscape.psi_mi.internal.model.InteractorTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.828 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapInteractionsToPsiOneTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.836 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapPsiOneToInteractionsTest Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.006 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapInteractionsToPsiTwoFiveTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.307 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapPsiTwoFiveToInteractionsTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.296 sec Running org.cytoscape.psi_mi.internal.plugin.PsiMiCyFileFilterTest Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.011 sec Results : Tests run: 23, Failures: 0, Errors: 0, Skipped: 0 [INFO] [cobertura:cobertura] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 126 classes. Report time: 2701ms [INFO] Cobertura Report generation was successful. [INFO] Execute maven plugin cobertura-maven-plugin done: 23519 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 332 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 340 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 974 ms [INFO] Sensor CheckstyleSensor done: 997 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/pmd.xml> [INFO] PMD output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 4351 ms [INFO] Sensor PmdSensor done: 4416 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 25 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 8 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 42 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 274 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/surefire-reports> [INFO] Sensor SurefireSensor done: 66 ms [INFO] Execute decorators... [INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar [INFO] Database optimization... [INFO] Deleting files data before Wed Nov 24 04:02:56 EST 2010 [INFO] Deleting unprocessed data before Wed Nov 24 04:02:56 EST 2010 [INFO] Database optimization done: 382 ms [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 53 seconds [INFO] Finished at: Wed Nov 24 16:02:56 EST 2010 [INFO] Final Memory: 77M/735M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
