See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/125/>
------------------------------------------ [...truncated 939 lines...] [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 145 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 43 ms [INFO] Squid extraction done: 792 ms [INFO] Sensor SquidSensor done: 2967 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Findbugs output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/findbugs-result.xml> [INFO] Execute Findbugs 1.3.9 done: 11080 ms [INFO] Sensor FindbugsSensor done: 11382 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] artifact org.codehaus.mojo:cobertura-maven-plugin: checking for updates from maven2-repository.dev.java.net [INFO] artifact org.codehaus.mojo:cobertura-maven-plugin: checking for updates from maven-repository.dev.java.net [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi] [INFO] task-segment: [org.codehaus.mojo:cobertura-maven-plugin::cobertura] [INFO] ------------------------------------------------------------------------ [INFO] Preparing cobertura:cobertura Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [jaxb2:xjc {execution: mi1}] [INFO] No changes detected in schema or binding files, skipping source generation. Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [jaxb2:xjc {execution: mi25}] [INFO] No changes detected in schema or binding files, skipping source generation. [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 3 resources Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [pax:compile] [INFO] Nothing to compile - all classes are up to date [INFO] [cobertura:instrument] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Instrumenting 126 files to <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/generated-classes/cobertura> Cobertura: Saved information on 126 classes. Instrument time: 4487ms [INFO] Instrumentation was successful. [INFO] [resources:testResources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 12 resources Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [pax:testCompile] [INFO] Nothing to compile - all classes are up to date Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository spring-osgi-snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/spring-osgi-snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:event-api:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-api/1.0-SNAPSHOT/model-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:model-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/event-api/1.0-SNAPSHOT/event-api-1.0-SNAPSHOT-tests.jar [INFO] Unable to find resource 'org.cytoscape:event-api:test-jar:tests:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/service-util/1.0-SNAPSHOT/service-util-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:service-util:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/model-impl/1.0-SNAPSHOT/model-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:model-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/) Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot//org/cytoscape/viewmodel-impl/1.0-SNAPSHOT/viewmodel-impl-1.0-SNAPSHOT.jar [INFO] Unable to find resource 'org.cytoscape:viewmodel-impl:jar:1.0-SNAPSHOT' in repository cytoscape_biopax_snapshot (http://cytoscape.wodaklab.org/nexus/content/repositories/biopax-snapshot/) [INFO] [surefire:test] [INFO] Surefire report directory: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.cytoscape.psi_mi.internal.cyto_mapper.MapFromCytoscapeTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.838 sec Running org.cytoscape.psi_mi.internal.plugin.PsiMiNetworkViewReaderTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.65 sec Running org.cytoscape.psi_mi.internal.cyto_mapper.MapToCytoscapeTest Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.058 sec Running org.cytoscape.psi_mi.internal.model.InteractorTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.109 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapInteractionsToPsiOneTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.284 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapPsiOneToInteractionsTest Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.71 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapInteractionsToPsiTwoFiveTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.215 sec Running org.cytoscape.psi_mi.internal.data_mapper.MapPsiTwoFiveToInteractionsTest Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.393 sec Running org.cytoscape.psi_mi.internal.plugin.PsiMiCyFileFilterTest Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.051 sec Results : Tests run: 23, Failures: 0, Errors: 0, Skipped: 0 [INFO] [cobertura:cobertura] [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 126 classes. Report time: 1929ms [INFO] Cobertura Report generation was successful. [INFO] Execute maven plugin cobertura-maven-plugin done: 29858 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 294 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 299 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 965 ms [INFO] Sensor CheckstyleSensor done: 996 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/pmd.xml> [INFO] PMD output report: <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 3740 ms [INFO] Sensor PmdSensor done: 3810 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 33 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 8 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 50 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 373 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://cytoscape.wodaklab.org/hudson/job/Cy3%20PSI-MI%20impl/ws/trunk/target/surefire-reports> [INFO] Sensor SurefireSensor done: 58 ms [INFO] Execute decorators... [INFO] ANALYSIS SUCCESSFUL, you can browse http://localhost:8021/sonar [INFO] Database optimization... [INFO] Deleting files data before Wed Nov 24 03:03:32 EST 2010 [INFO] Deleting unprocessed data before Wed Nov 24 03:03:45 EST 2010 [INFO] Database optimization done: 14737 ms [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESSFUL [INFO] ------------------------------------------------------------------------ [INFO] Total time: 1 minute 26 seconds [INFO] Finished at: Wed Nov 24 15:03:47 EST 2010 [INFO] Final Memory: 76M/703M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
