See <http://cytoscape.wodaklab.org/hudson/job/Cy3%20biopax-impl/2/>
------------------------------------------ [...truncated 37 lines...] A src/main/java/org/cytoscape/biopax/internal/util AU src/main/java/org/cytoscape/biopax/internal/util/AttributeUtil.java AU src/main/java/org/cytoscape/biopax/internal/util/ParentFinder.java AU src/main/java/org/cytoscape/biopax/internal/util/CyNetworkUtil.java AU src/main/java/org/cytoscape/biopax/internal/util/WebFileConnect.java AU src/main/java/org/cytoscape/biopax/internal/util/CytoscapeWrapper.java AU src/main/java/org/cytoscape/biopax/internal/util/CySessionUtil.java AU src/main/java/org/cytoscape/biopax/internal/util/ExternalLinkUtil.java A src/main/java/org/cytoscape/biopax/util AU src/main/java/org/cytoscape/biopax/util/BioPaxUtil.java AU src/main/java/org/cytoscape/biopax/util/BioPaxVisualStyleUtil.java AU src/main/java/org/cytoscape/biopax/MapBioPaxToCytoscape.java A src/main/resources A src/main/resources/META-INF A src/main/resources/META-INF/spring AU src/main/resources/META-INF/spring/bundle-context-osgi.xml AU src/main/resources/META-INF/spring/bundle-context.xml A src/main/resources/org A src/main/resources/org/cytoscape A src/main/resources/org/cytoscape/biopax A src/main/resources/org/cytoscape/biopax/internal AU src/main/resources/org/cytoscape/biopax/internal/phos-node-selected-top.jpg AU src/main/resources/org/cytoscape/biopax/internal/phos-node-selected-bottom.jpg AU src/main/resources/org/cytoscape/biopax/internal/phos-node-selected-left.jpg A src/main/resources/org/cytoscape/biopax/internal/view AU src/main/resources/org/cytoscape/biopax/internal/view/info.gif AU src/main/resources/org/cytoscape/biopax/internal/view/legend.html AU src/main/resources/org/cytoscape/biopax/internal/view/legend.png AU src/main/resources/org/cytoscape/biopax/internal/view/legend.gif AU src/main/resources/org/cytoscape/biopax/internal/view/binary_legend.html AU src/main/resources/org/cytoscape/biopax/internal/view/glasses.gif AU src/main/resources/org/cytoscape/biopax/internal/view/read_obj.gif AU src/main/resources/org/cytoscape/biopax/internal/phos-node.jpg AU src/main/resources/org/cytoscape/biopax/internal/phos-node-selected-right.jpg AU pom.xml At revision 24722 no change for http://chianti.ucsd.edu/svn/core3/biopax-impl/trunk since the previous build Found mavenVersion 3.0.3 from file jar:file:/R1/tools/maven/apache-maven-3.0.3/lib/maven-core-3.0.3.jar!/META-INF/maven/org.apache.maven/maven-core/pom.properties No emails were triggered. Parsing POMs [trunk] $ java -cp /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.401.jar:/R1/tools/maven/apache-maven-3.0.3/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /R1/tools/maven/apache-maven-3.0.3 /R1/resources/webservers/tomcat_2/webapps/jenkins/WEB-INF/lib/remoting-1.401.jar /R1/resources/webapps/cytoscape_build_sys/hudson_home/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.401.jar 46046 <===[HUDSON REMOTING CAPACITY]===> channel started Executing Maven: -B -f <http://cytoscape.wodaklab.org/hudson/job/Cy3%20biopax-impl/ws/trunk/pom.xml> deploy [INFO] Scanning for projects... [WARNING] [WARNING] Some problems were encountered while building the effective model for org.cytoscape:biopax-impl:bundle:1.0-SNAPSHOT [WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-javadoc-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 57, column 12 [WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-compiler-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 38, column 12 [WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-source-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 82, column 12 [WARNING] The expression ${pom.version} is deprecated. Please use ${project.version} instead. [WARNING] 'reporting.plugins.plugin.version' for org.apache.maven.plugins:maven-pmd-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 262, column 12 [WARNING] 'reporting.plugins.plugin.version' for org.codehaus.mojo:cobertura-maven-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 276, column 12 [WARNING] 'reporting.plugins.plugin.version' for org.codehaus.mojo:jdepend-maven-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 287, column 12 [WARNING] 'reporting.plugins.plugin.version' for org.apache.maven.plugins:maven-javadoc-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 291, column 12 [WARNING] 'reporting.plugins.plugin.version' for org.codehaus.mojo:jxr-maven-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 305, column 12 [WARNING] 'reporting.plugins.plugin.version' for org.apache.maven.plugins:maven-surefire-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 309, column 12 [WARNING] 'reporting.plugins.plugin.version' for org.apache.maven.plugins:maven-surefire-report-plugin is missing. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 317, column 12 [WARNING] 'pluginRepositories.pluginRepository.layout' for maven-repository.dev.java.net uses the unsupported value 'legacy', artifact resolution might fail. @ org.cytoscape:parent:3.0.0-alpha3, /home/bturner/.m2/repository/org/cytoscape/parent/3.0.0-alpha3/parent-3.0.0-alpha3.pom, line 236, column 12 [WARNING] [WARNING] It is highly recommended to fix these problems because they threaten the stability of your build. [WARNING] [WARNING] For this reason, future Maven versions might no longer support building such malformed projects. [WARNING] [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building org.cytoscape.biopax-impl [org.cytoscape.biopax] 1.0-SNAPSHOT [INFO] ------------------------------------------------------------------------ [WARNING] Could not transfer metadata org.apache.maven.plugins:maven-compiler-plugin/maven-metadata.xml from/to maven-repository.dev.java.net (http://download.java.net/maven/1): No connector available to access repository maven-repository.dev.java.net (http://download.java.net/maven/1) of type legacy using the available factories WagonRepositoryConnectorFactory [WARNING] Could not transfer metadata org.apache.maven.plugins:maven-javadoc-plugin/maven-metadata.xml from/to maven-repository.dev.java.net (http://download.java.net/maven/1): No connector available to access repository maven-repository.dev.java.net (http://download.java.net/maven/1) of type legacy using the available factories WagonRepositoryConnectorFactory [WARNING] Could not transfer metadata org.apache.maven.plugins:maven-source-plugin/maven-metadata.xml from/to maven-repository.dev.java.net (http://download.java.net/maven/1): No connector available to access repository maven-repository.dev.java.net (http://download.java.net/maven/1) of type legacy using the available factories WagonRepositoryConnectorFactory [WARNING] Could not transfer metadata org.apache.maven.plugins:maven-install-plugin/maven-metadata.xml from/to maven-repository.dev.java.net (http://download.java.net/maven/1): No connector available to access repository maven-repository.dev.java.net (http://download.java.net/maven/1) of type legacy using the available factories WagonRepositoryConnectorFactory [WARNING] Could not transfer metadata org.apache.maven.plugins:maven-resources-plugin/maven-metadata.xml from/to maven-repository.dev.java.net (http://download.java.net/maven/1): No connector available to access repository maven-repository.dev.java.net (http://download.java.net/maven/1) of type legacy using the available factories WagonRepositoryConnectorFactory [WARNING] Could not transfer metadata org.apache.maven.plugins:maven-surefire-plugin/maven-metadata.xml from/to maven-repository.dev.java.net (http://download.java.net/maven/1): No connector available to access repository maven-repository.dev.java.net (http://download.java.net/maven/1) of type legacy using the available factories WagonRepositoryConnectorFactory [WARNING] Could not transfer metadata org.apache.maven.plugins:maven-deploy-plugin/maven-metadata.xml from/to maven-repository.dev.java.net (http://download.java.net/maven/1): No connector available to access repository maven-repository.dev.java.net (http://download.java.net/maven/1) of type legacy using the available factories WagonRepositoryConnectorFactory [INFO] [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ biopax-impl --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 14 resources [INFO] [INFO] --- maven-pax-plugin:1.4:compile (default-compile) @ biopax-impl --- mojoFailed org.ops4j:maven-pax-plugin:1.4(default-compile) projectFailed org.cytoscape:biopax-impl:1.0-SNAPSHOT [JENKINS] Archiving <http://cytoscape.wodaklab.org/hudson/job/Cy3%20biopax-impl/ws/trunk/pom.xml> to /R1/resources/webapps/cytoscape_build_sys/hudson_home/jobs/Cy3 biopax-impl/modules/org.cytoscape$biopax-impl/builds/2011-04-08_14-44-40/archive/org.cytoscape/biopax-impl/1.0-SNAPSHOT/pom.xml sessionEnded [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 2.804s [INFO] Finished at: Fri Apr 08 14:44:46 EDT 2011 [INFO] Final Memory: 13M/155M [INFO] ------------------------------------------------------------------------ mavenExecutionResult exceptions not empty org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.ops4j:maven-pax-plugin:1.4:compile (default-compile) on project biopax-impl: Execution default-compile of goal org.ops4j:maven-pax-plugin:1.4:compile failed: An API incompatibility was encountered while executing org.ops4j:maven-pax-plugin:1.4:compile: java.lang.NoSuchMethodError: org.apache.maven.project.MavenProject.addPlugin(Lorg/apache/maven/model/Plugin;)V ----------------------------------------------------- realm = plugin>org.ops4j:maven-pax-plugin:1.4 strategy = org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy urls[0] = file:/home/bturner/.m2/repository/org/ops4j/maven-pax-plugin/1.4/maven-pax-plugin-1.4.jar urls[1] = file:/home/bturner/.m2/repository/org/apache/maven/archetype/maven-archetype-core/1.0-alpha-7/maven-archetype-core-1.0-alpha-7.jar urls[2] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-velocity/1.1.2/plexus-velocity-1.1.2.jar urls[3] = file:/home/bturner/.m2/repository/commons-collections/commons-collections/2.0/commons-collections-2.0.jar urls[4] = file:/home/bturner/.m2/repository/commons-logging/commons-logging-api/1.0.4/commons-logging-api-1.0.4.jar urls[5] = file:/home/bturner/.m2/repository/velocity/velocity/1.4/velocity-1.4.jar urls[6] = file:/home/bturner/.m2/repository/velocity/velocity-dep/1.4/velocity-dep-1.4.jar urls[7] = file:/home/bturner/.m2/repository/dom4j/dom4j/1.6.1/dom4j-1.6.1.jar urls[8] = file:/home/bturner/.m2/repository/xml-apis/xml-apis/1.0.b2/xml-apis-1.0.b2.jar urls[9] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-downloader/1.0/maven-downloader-1.0.jar urls[10] = file:/home/bturner/.m2/repository/org/apache/maven/plugins/maven-compiler-plugin/2.0.2/maven-compiler-plugin-2.0.2.jar urls[11] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-javac/1.5.3/plexus-compiler-javac-1.5.3.jar urls[12] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-api/1.5.3/plexus-compiler-api-1.5.3.jar urls[13] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-manager/1.5.3/plexus-compiler-manager-1.5.3.jar urls[14] = file:/home/bturner/.m2/repository/org/apache/maven/plugins/maven-eclipse-plugin/2.5.1/maven-eclipse-plugin-2.5.1.jar urls[15] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-interactivity-jline/1.0-alpha-5/plexus-interactivity-jline-1.0-alpha-5.jar urls[16] = file:/home/bturner/.m2/repository/jline/jline/0.9.1/jline-0.9.1.jar urls[17] = file:/home/bturner/.m2/repository/org/apache/maven/maven-archiver/2.2/maven-archiver-2.2.jar urls[18] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-resources/1.0-alpha-4/plexus-resources-1.0-alpha-4.jar urls[19] = file:/home/bturner/.m2/repository/org/eclipse/core/resources/3.3.0-v20070604/resources-3.3.0-v20070604.jar urls[20] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-osgi/0.2.0/maven-osgi-0.2.0.jar urls[21] = file:/home/bturner/.m2/repository/org/apache/maven/shared/file-management/1.2/file-management-1.2.jar urls[22] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-shared-io/1.1/maven-shared-io-1.1.jar urls[23] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-utils/1.4.7/plexus-utils-1.4.7.jar urls[24] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-archiver/1.0-alpha-7/plexus-archiver-1.0-alpha-7.jar urls[25] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-interactivity-api/1.0-alpha-5/plexus-interactivity-api-1.0-alpha-5.jar urls[26] = file:/home/bturner/.m2/repository/junit/junit/3.8.1/junit-3.8.1.jar urls[27] = file:/home/bturner/.m2/repository/plexus/plexus-utils/1.0.2/plexus-utils-1.0.2.jar urls[28] = file:/home/bturner/.m2/repository/biz/aQute/bndlib/0.0.255/bndlib-0.0.255.jar Number of foreign imports: 1 import: Entry[import from realm ClassRealm[project>org.cytoscape:biopax-impl:1.0-SNAPSHOT, parent: ClassRealm[maven.api, parent: null]]] ----------------------------------------------------- at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:225) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:146) at hudson.maven.Maven3Builder.call(Maven3Builder.java:124) at hudson.maven.Maven3Builder.call(Maven3Builder.java:71) at hudson.remoting.UserRequest.perform(UserRequest.java:114) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:270) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:619) Caused by: org.apache.maven.plugin.PluginExecutionException: Execution default-compile of goal org.ops4j:maven-pax-plugin:1.4:compile failed: An API incompatibility was encountered while executing org.ops4j:maven-pax-plugin:1.4:compile: java.lang.NoSuchMethodError: org.apache.maven.project.MavenProject.addPlugin(Lorg/apache/maven/model/Plugin;)V ----------------------------------------------------- realm = plugin>org.ops4j:maven-pax-plugin:1.4 strategy = org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy urls[0] = file:/home/bturner/.m2/repository/org/ops4j/maven-pax-plugin/1.4/maven-pax-plugin-1.4.jar urls[1] = file:/home/bturner/.m2/repository/org/apache/maven/archetype/maven-archetype-core/1.0-alpha-7/maven-archetype-core-1.0-alpha-7.jar urls[2] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-velocity/1.1.2/plexus-velocity-1.1.2.jar urls[3] = file:/home/bturner/.m2/repository/commons-collections/commons-collections/2.0/commons-collections-2.0.jar urls[4] = file:/home/bturner/.m2/repository/commons-logging/commons-logging-api/1.0.4/commons-logging-api-1.0.4.jar urls[5] = file:/home/bturner/.m2/repository/velocity/velocity/1.4/velocity-1.4.jar urls[6] = file:/home/bturner/.m2/repository/velocity/velocity-dep/1.4/velocity-dep-1.4.jar urls[7] = file:/home/bturner/.m2/repository/dom4j/dom4j/1.6.1/dom4j-1.6.1.jar urls[8] = file:/home/bturner/.m2/repository/xml-apis/xml-apis/1.0.b2/xml-apis-1.0.b2.jar urls[9] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-downloader/1.0/maven-downloader-1.0.jar urls[10] = file:/home/bturner/.m2/repository/org/apache/maven/plugins/maven-compiler-plugin/2.0.2/maven-compiler-plugin-2.0.2.jar urls[11] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-javac/1.5.3/plexus-compiler-javac-1.5.3.jar urls[12] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-api/1.5.3/plexus-compiler-api-1.5.3.jar urls[13] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-manager/1.5.3/plexus-compiler-manager-1.5.3.jar urls[14] = file:/home/bturner/.m2/repository/org/apache/maven/plugins/maven-eclipse-plugin/2.5.1/maven-eclipse-plugin-2.5.1.jar urls[15] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-interactivity-jline/1.0-alpha-5/plexus-interactivity-jline-1.0-alpha-5.jar urls[16] = file:/home/bturner/.m2/repository/jline/jline/0.9.1/jline-0.9.1.jar urls[17] = file:/home/bturner/.m2/repository/org/apache/maven/maven-archiver/2.2/maven-archiver-2.2.jar urls[18] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-resources/1.0-alpha-4/plexus-resources-1.0-alpha-4.jar urls[19] = file:/home/bturner/.m2/repository/org/eclipse/core/resources/3.3.0-v20070604/resources-3.3.0-v20070604.jar urls[20] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-osgi/0.2.0/maven-osgi-0.2.0.jar urls[21] = file:/home/bturner/.m2/repository/org/apache/maven/shared/file-management/1.2/file-management-1.2.jar urls[22] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-shared-io/1.1/maven-shared-io-1.1.jar urls[23] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-utils/1.4.7/plexus-utils-1.4.7.jar urls[24] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-archiver/1.0-alpha-7/plexus-archiver-1.0-alpha-7.jar urls[25] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-interactivity-api/1.0-alpha-5/plexus-interactivity-api-1.0-alpha-5.jar urls[26] = file:/home/bturner/.m2/repository/junit/junit/3.8.1/junit-3.8.1.jar urls[27] = file:/home/bturner/.m2/repository/plexus/plexus-utils/1.0.2/plexus-utils-1.0.2.jar urls[28] = file:/home/bturner/.m2/repository/biz/aQute/bndlib/0.0.255/bndlib-0.0.255.jar Number of foreign imports: 1 import: Entry[import from realm ClassRealm[project>org.cytoscape:biopax-impl:1.0-SNAPSHOT, parent: ClassRealm[maven.api, parent: null]]] ----------------------------------------------------- at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:139) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Caused by: org.apache.maven.plugin.PluginContainerException: An API incompatibility was encountered while executing org.ops4j:maven-pax-plugin:1.4:compile: java.lang.NoSuchMethodError: org.apache.maven.project.MavenProject.addPlugin(Lorg/apache/maven/model/Plugin;)V ----------------------------------------------------- realm = plugin>org.ops4j:maven-pax-plugin:1.4 strategy = org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy urls[0] = file:/home/bturner/.m2/repository/org/ops4j/maven-pax-plugin/1.4/maven-pax-plugin-1.4.jar urls[1] = file:/home/bturner/.m2/repository/org/apache/maven/archetype/maven-archetype-core/1.0-alpha-7/maven-archetype-core-1.0-alpha-7.jar urls[2] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-velocity/1.1.2/plexus-velocity-1.1.2.jar urls[3] = file:/home/bturner/.m2/repository/commons-collections/commons-collections/2.0/commons-collections-2.0.jar urls[4] = file:/home/bturner/.m2/repository/commons-logging/commons-logging-api/1.0.4/commons-logging-api-1.0.4.jar urls[5] = file:/home/bturner/.m2/repository/velocity/velocity/1.4/velocity-1.4.jar urls[6] = file:/home/bturner/.m2/repository/velocity/velocity-dep/1.4/velocity-dep-1.4.jar urls[7] = file:/home/bturner/.m2/repository/dom4j/dom4j/1.6.1/dom4j-1.6.1.jar urls[8] = file:/home/bturner/.m2/repository/xml-apis/xml-apis/1.0.b2/xml-apis-1.0.b2.jar urls[9] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-downloader/1.0/maven-downloader-1.0.jar urls[10] = file:/home/bturner/.m2/repository/org/apache/maven/plugins/maven-compiler-plugin/2.0.2/maven-compiler-plugin-2.0.2.jar urls[11] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-javac/1.5.3/plexus-compiler-javac-1.5.3.jar urls[12] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-api/1.5.3/plexus-compiler-api-1.5.3.jar urls[13] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-compiler-manager/1.5.3/plexus-compiler-manager-1.5.3.jar urls[14] = file:/home/bturner/.m2/repository/org/apache/maven/plugins/maven-eclipse-plugin/2.5.1/maven-eclipse-plugin-2.5.1.jar urls[15] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-interactivity-jline/1.0-alpha-5/plexus-interactivity-jline-1.0-alpha-5.jar urls[16] = file:/home/bturner/.m2/repository/jline/jline/0.9.1/jline-0.9.1.jar urls[17] = file:/home/bturner/.m2/repository/org/apache/maven/maven-archiver/2.2/maven-archiver-2.2.jar urls[18] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-resources/1.0-alpha-4/plexus-resources-1.0-alpha-4.jar urls[19] = file:/home/bturner/.m2/repository/org/eclipse/core/resources/3.3.0-v20070604/resources-3.3.0-v20070604.jar urls[20] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-osgi/0.2.0/maven-osgi-0.2.0.jar urls[21] = file:/home/bturner/.m2/repository/org/apache/maven/shared/file-management/1.2/file-management-1.2.jar urls[22] = file:/home/bturner/.m2/repository/org/apache/maven/shared/maven-shared-io/1.1/maven-shared-io-1.1.jar urls[23] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-utils/1.4.7/plexus-utils-1.4.7.jar urls[24] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-archiver/1.0-alpha-7/plexus-archiver-1.0-alpha-7.jar urls[25] = file:/home/bturner/.m2/repository/org/codehaus/plexus/plexus-interactivity-api/1.0-alpha-5/plexus-interactivity-api-1.0-alpha-5.jar urls[26] = file:/home/bturner/.m2/repository/junit/junit/3.8.1/junit-3.8.1.jar urls[27] = file:/home/bturner/.m2/repository/plexus/plexus-utils/1.0.2/plexus-utils-1.0.2.jar urls[28] = file:/home/bturner/.m2/repository/biz/aQute/bndlib/0.0.255/bndlib-0.0.255.jar Number of foreign imports: 1 import: Entry[import from realm ClassRealm[project>org.cytoscape:biopax-impl:1.0-SNAPSHOT, parent: ClassRealm[maven.api, parent: null]]] ----------------------------------------------------- at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:137) ... 28 more Caused by: java.lang.NoSuchMethodError: org.apache.maven.project.MavenProject.addPlugin(Lorg/apache/maven/model/Plugin;)V at org.ops4j.pax.construct.lifecycle.BundleCompilerMojo.mergeCompilerConfiguration(BundleCompilerMojo.java:102) at org.ops4j.pax.construct.lifecycle.BundleCompilerMojo.execute(BundleCompilerMojo.java:70) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) ... 28 more Sending e-mails to: [email protected] channel stopped Skipping sonar analysis due to user build trigger -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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