See <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/279/>
------------------------------------------ [...truncated 83717 lines...] [INFO] Initializer CoberturaMavenInitializer done: 0 ms [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 431 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 511 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 130 ms [INFO] Java Squid scan... [INFO] Java Squid scan done: 0 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 110 ms [INFO] Squid extraction done: 260 ms [INFO] Sensor SquidSensor done: 918 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Found findbugs plugin: file:/tmp/sonar-batch7156409866492636699303200729526475/plugins/findbugs/META-INF/lib/findbugs-1.3.9.jar [INFO] Loaded plugin edu.umd.cs.findbugs.plugins.core [INFO] Findbugs output report: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-analyzer-impl/target/sonar/findbugs-result.xml> The following classes needed for analysis were missing: org.osgi.util.tracker.ServiceTracker org.freehep.util.UserProperties org.freehep.util.Value org.freehep.xml.util.XMLWriter org.freehep.util.io.WriterOutputStream org.freehep.util.io.Base64OutputStream [INFO] Execute Findbugs 1.3.9 done: 9417 ms [INFO] Sensor FindbugsSensor done: 9472 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-analyzer-impl/target/surefire-reports> [INFO] Sensor SurefireSensor done: 0 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 90 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle configuration: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-analyzer-impl/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 1097 ms [INFO] Sensor CheckstyleSensor done: 1098 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-analyzer-impl/target/sonar/pmd.xml> [INFO] PMD output report: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-analyzer-impl/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 7743 ms [INFO] Sensor PmdSensor done: 7807 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 122 ms [INFO] Sensor ProfileEventsSensor... [INFO] Sensor ProfileEventsSensor done: 3 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 6 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 3 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-analyzer-impl/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 210 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 31 ms [INFO] Execute decorators... [INFO] ------------- Analyzing Cytoscape Merge Impl (network-merge-impl) [INFO] Selected quality profile : [name=Cytoscape,language=java] [INFO] Configure maven plugins... [INFO] Compare to previous analysis (2013-02-05) [INFO] Compare over 5 days (2013-01-31, analysis of 2013-02-02 08:55:01.0) [INFO] Compare over 30 days (2013-01-06, analysis of 2013-02-02 08:55:01.0) [INFO] Initializer FindbugsMavenInitializer... [INFO] Initializer FindbugsMavenInitializer done: 0 ms [INFO] Initializer MavenInitializer... [INFO] Java source version: 1.6 [INFO] Java target version: 1.6 [INFO] Source encoding: UTF-8 [INFO] Initializer MavenInitializer done: 0 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] Execute org.codehaus.mojo:cobertura-maven-plugin:2.5:cobertura... [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Merge Impl (network-merge-impl) 3.1.0-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] >>> cobertura-maven-plugin:2.5:cobertura (default-cli) @ network-merge-impl >>> [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ network-merge-impl --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 12 resources [INFO] [INFO] --- maven-compiler-plugin:2.5.1:compile (default-compile) @ network-merge-impl --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- cobertura-maven-plugin:2.5:instrument (default-cli) @ network-merge-impl --- [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 75 classes. Instrumenting 75 files to <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/target/generated-classes/cobertura> [cobertura] WARN [main] net.sourceforge.cobertura.instrument.ClassInstrumenter - No line number information found for class org.cytoscape.network.merge.internal.ui.CollapsiblePanel$1. Perhaps you need to compile with debug=true? Cobertura: Saved information on 75 classes. Instrument time: 305ms [INFO] Instrumentation was successful. [INFO] NOT adding cobertura ser file to attached artifacts list. [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ network-merge-impl --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/src/test/resources> [INFO] [INFO] --- maven-compiler-plugin:2.5.1:testCompile (default-testCompile) @ network-merge-impl --- [INFO] No sources to compile [INFO] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ network-merge-impl --- [INFO] No tests to run. [INFO] [INFO] <<< cobertura-maven-plugin:2.5:cobertura (default-cli) @ network-merge-impl <<< [INFO] [INFO] --- cobertura-maven-plugin:2.5:cobertura (default-cli) @ network-merge-impl --- [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 75 classes. Report time: 395ms [INFO] Cobertura Report generation was successful. [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ [INFO] Total time: 6:30.112s [INFO] Finished at: Tue Feb 05 20:29:34 GMT-05:00 2013 [INFO] Final Memory: 79M/288M [INFO] ------------------------------------------------------------------------ [INFO] Execute org.codehaus.mojo:cobertura-maven-plugin:2.5:cobertura done: 1293 ms [INFO] Execute maven plugin cobertura-maven-plugin done: 1293 ms [INFO] Initializer CoberturaMavenInitializer... [INFO] Initializer CoberturaMavenInitializer done: 0 ms [INFO] Sensor JavaSourceImporter... [INFO] Sensor JavaSourceImporter done: 316 ms [INFO] Sensor SquidSensor... [INFO] Java AST scan... [INFO] Java AST scan done: 335 ms [INFO] Java bytecode scan... [INFO] Java bytecode scan done: 119 ms [INFO] Java Squid scan... [INFO] Java Squid scan done: 0 ms [INFO] Squid extraction... [INFO] Package design analysis... [INFO] Package design analysis done: 39 ms [INFO] Squid extraction done: 106 ms [INFO] Sensor SquidSensor done: 577 ms [INFO] Sensor FindbugsSensor... [INFO] Execute Findbugs 1.3.9... [INFO] Found findbugs plugin: file:/tmp/sonar-batch7156409866492636699303200729526475/plugins/findbugs/META-INF/lib/findbugs-1.3.9.jar [INFO] Loaded plugin edu.umd.cs.findbugs.plugins.core [INFO] Findbugs output report: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/target/sonar/findbugs-result.xml> The following classes needed for analysis were missing: org.osgi.util.tracker.ServiceTracker [INFO] Execute Findbugs 1.3.9 done: 4080 ms [INFO] Sensor FindbugsSensor done: 4095 ms [INFO] Sensor SurefireSensor... [INFO] parsing <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/target/surefire-reports> [INFO] Sensor SurefireSensor done: 0 ms [INFO] Sensor CpdSensor... [INFO] Sensor CpdSensor done: 25 ms [INFO] Sensor CheckstyleSensor... [INFO] Execute Checkstyle 5.1... [INFO] Checkstyle configuration: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/target/sonar/checkstyle.xml> [INFO] Execute Checkstyle 5.1 done: 562 ms [INFO] Sensor CheckstyleSensor done: 563 ms [INFO] Sensor PmdSensor... [INFO] Execute PMD 4.2.5... [INFO] Java version: 1.6 [INFO] PMD configuration: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/target/sonar/pmd.xml> [INFO] PMD output report: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/target/sonar/pmd-result.xml> [INFO] Execute PMD 4.2.5 done: 3062 ms [INFO] Sensor PmdSensor done: 3089 ms [INFO] Sensor ProfileSensor... [INFO] Sensor ProfileSensor done: 122 ms [INFO] Sensor ProfileEventsSensor... [INFO] Sensor ProfileEventsSensor done: 2 ms [INFO] Sensor ProjectLinksSensor... [INFO] Sensor ProjectLinksSensor done: 7 ms [INFO] Sensor VersionEventsSensor... [INFO] Sensor VersionEventsSensor done: 2 ms [INFO] Sensor CoberturaSensor... [INFO] parsing <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/network-merge-impl/target/site/cobertura/coverage.xml> [INFO] Sensor CoberturaSensor done: 41 ms [INFO] Sensor Maven dependencies... [INFO] Sensor Maven dependencies done: 9 ms [INFO] Execute decorators... [INFO] ------------- Analyzing Cytoscape App Impl (app-impl) [INFO] Selected quality profile : [name=Cytoscape,language=java] [INFO] Configure maven plugins... [INFO] Compare to previous analysis (2013-02-05) [INFO] Compare over 5 days (2013-01-31, analysis of 2013-02-02 08:55:01.0) [INFO] Compare over 30 days (2013-01-06, analysis of 2013-02-02 08:55:01.0) [INFO] Initializer FindbugsMavenInitializer... [INFO] Initializer FindbugsMavenInitializer done: 0 ms [INFO] Initializer MavenInitializer... [INFO] Java source version: 1.6 [INFO] Java target version: 1.6 [INFO] Source encoding: UTF-8 [INFO] Initializer MavenInitializer done: 0 ms [INFO] Execute maven plugin cobertura-maven-plugin... [INFO] Execute org.codehaus.mojo:cobertura-maven-plugin:2.5:cobertura... [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape App Impl (app-impl) 3.1.0-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [INFO] >>> cobertura-maven-plugin:2.5:cobertura (default-cli) @ app-impl >>> [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ app-impl --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 5 resources [INFO] Copying 0 resource [INFO] [INFO] --- maven-compiler-plugin:2.5.1:compile (default-compile) @ app-impl --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- cobertura-maven-plugin:2.5:instrument (default-cli) @ app-impl --- [INFO] Cobertura 1.9.4.1 - GNU GPL License (NO WARRANTY) - See COPYRIGHT file Cobertura: Loaded information on 135 classes. Instrumenting 139 files to <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/app-impl/target/generated-classes/cobertura> [cobertura] WARN [main] net.sourceforge.cobertura.instrument.ClassInstrumenter - No line number information found for class org.cytoscape.app.internal.net.server.AppGetResponder$1. Perhaps you need to compile with debug=true? Cobertura: Saved information on 139 classes. Instrument time: 360ms [INFO] Instrumentation was successful. [INFO] NOT adding cobertura ser file to attached artifacts list. [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ app-impl --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/app-impl/src/test/resources> [INFO] [INFO] --- maven-compiler-plugin:2.5.1:testCompile (default-testCompile) @ app-impl --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ app-impl --- [INFO] Surefire report directory: <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/ws/app-impl/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.cytoscape.app.internal.ui.downloadsites.DownloadSitesManagerTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.039 sec Running org.cytoscape.app.internal.net.server.CyHttpdImplTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.099 sec Running org.cytoscape.app.internal.net.server.OriginOptionsBeforeResponseTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 sec Running org.cytoscape.app.internal.net.server.AddAllowOriginHeaderTest Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 sec Running org.cytoscape.app.internal.net.server.AddAccessControlAllowOriginHeaderAfterResponseTest Sonar analysis completed: FAILURE Build step 'Sonar' changed build result to FAILURE Build step 'Sonar' marked build as failure -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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