A few things to add to what Bruno says:
On Monday, March 12, 2018 at 2:40:37 AM UTC+1, Bruno Turcksin wrote:
> On Sunday, March 11, 2018 at 9:27:40 AM UTC-4, Marquito Forrest wrote:
>> In summary the situation is:
>> - Debian testing image (to get recent gcc)
>> - Miniconda Python 3.6 (my own Dockerfile, cf. file 1)
>> - Latest spack from github (another Dockerfile derived from file 1, cf.
>> file 2)
>> - Then in a bash I ran "spack install dealii -trilinos -oce ^firstname.lastname@example.org"
>> Since PETSc failed to build some FORTRAN specific stuff (f90-mod)
>> and I assumed we don't need any FORTRAN bindings
>> I ran "spack edit petsc" and set "--with-fc=0", which led to a
>> successful compilation of PETSc.
>> At last the dealii compilation failed but I was not able to deduce
>> any logical steps to take from the error messages.
> A few things:
> 1) there is a binary available for Mac see here
> 2) there are people installing deal.II with spack on mac so you may want
> to post your problem here so we can help you
yes. My best guess is that you miss fortran compiler, which is required in
a few places for dependencies.
This is mention here https://github.com/dealii/dealii/wiki/deal.II-in-Spack
You would need to install `spack install gcc` and then add `gfortran` to
the `clang` compiler family in
> 3) we have several docker images on dockerhub see
> https://hub.docker.com/u/dealii/ deal.ii/full-depends was updated two
> days ago so you may want to give it a try. If you want to have your own
> Dockerfile, I suggest that you take a look at ours here
> 4) your installation fails with this error:
> g++: internal compiler error
> this happens when you don't have enough ram. Try using less
> processors. You are using 4 right now, try with one.
you can do that with `spack install -j 1 dealii
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