Hi Bruno!
Attached is the configuration log.
I use MKL for petsc and p4est.
Thanks,
Sean
On Thursday, February 14, 2019 at 4:22:39 PM UTC+1, Bruno Turcksin wrote:
>
> Sean,
>
> On Thursday, February 14, 2019 at 9:48:56 AM UTC-5, Sean McGovern wrote:
>>
>> I am trying to install dealii with petsc and p4est on the cluster in
>> Juelich with intel 19. It has been running with intel 18. As others have
>> suggested, I have turned DEAL_II_WITH_CXX17=OFF, I have used the flag
>> "-xhost", but I run into errors relating to vectorization (ALTIVEC). I
>> have used the bundled tbb, and using the loaded tbb module, I get the
>> errors in the log attached.
>>
> This error is normal, we check for ALTIVEC which you don't have on your
> machine (ALTIVEC is only for IBM machine) and since we can't find
> altivec.h, we disable the altivec vectorization. What bothers me more is
> that it seems that you have a problem with MKL:
>
> /gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_core.a(mkl_get_mpi_wrappers_static.o):mkl_get_mpi_wrappers.c:function
> mkl_serv_get_mpi_wrappers: error: undefined reference to
> 'MKLMPI_Get_wrappers'
>
>
> What's the configuration you are trying to use?
>
> Best,
>
> Bruno
>
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-- This is CMake 3.13.0
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_external_macros.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_add_flags.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_check_compiler_setup.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_check_cxx_compiler_bug.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_check_mpi_interface.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_clear_cmake_required.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_configure_feature.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_add_definitions.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_add_library.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_add_test.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_find_file.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_find_library.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_find_path.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_find_program.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_insource_setup_target.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_package_handle.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_pickup_tests.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_query_git_information.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_deal_ii_setup_target.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_decorate_with_stars.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_enable_if_links.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_enable_if_supported.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_enable_language_optional.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_evaluate_expression.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_expand_instantiations.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_filter_system_libraries.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_find_package.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_find_system_library.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_item_matches.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_purge_feature.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_register_feature.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_remove_duplicates.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_replace_flag.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_reset_cmake_required.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_set_if_empty.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_setup_source_list.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_setup_unity_target.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_strip_flag.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_switch_library_preference.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_to_string.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_to_string_and_add_prefix.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_unset_if_changed.cmake
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/macros/macro_verbose_include.cmake
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_cached_variables.cmake
-- Prepending ${CMAKE_CXX_FLAGS} to ${DEAL_II_CXX_FLAGS}
-- Prepending ${CUDA_NVCC_FLAGS} to ${DEAL_II_CUDA_FLAGS}
-- The CXX compiler identification is Intel 19.0.0.20180804
-- The C compiler identification is Intel 19.0.0.20180804
-- Check for working CXX compiler:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpicxx
-- Check for working CXX compiler:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpicxx
-- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check for working C compiler:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpicc
-- Check for working C compiler:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpicc
-- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- The Fortran compiler identification is Intel 19.0.0.20180804
-- Check for working Fortran compiler:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpif90
-- Check for working Fortran compiler:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpif90
-- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpif90
supports Fortran 90
-- Checking whether
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpif90
supports Fortran 90 -- yes
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_deal_ii.cmake
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_compiler_flags.cmake
-- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_DEBUG
-- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_DEBUG - Success
-- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_RELEASE
-- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_RELEASE - Success
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_compiler_flags_intel.cmake
-- Performing Test DEAL_II_HAVE_FLAG_fpic
-- Performing Test DEAL_II_HAVE_FLAG_fpic - Success
-- Performing Test DEAL_II_HAVE_FLAG_Wl__as_needed
-- Performing Test DEAL_II_HAVE_FLAG_Wl__as_needed - Success
-- Performing Test DEAL_II_HAVE_FLAG_ansi
-- Performing Test DEAL_II_HAVE_FLAG_ansi - Success
-- Performing Test DEAL_II_HAVE_FLAG_w2
-- Performing Test DEAL_II_HAVE_FLAG_w2 - Success
-- Performing Test DEAL_II_HAVE_FLAG_diag_disable=remark
-- Performing Test DEAL_II_HAVE_FLAG_diag_disable=remark - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd21
-- Performing Test DEAL_II_HAVE_FLAG_wd21 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd68
-- Performing Test DEAL_II_HAVE_FLAG_wd68 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd135
-- Performing Test DEAL_II_HAVE_FLAG_wd135 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd175
-- Performing Test DEAL_II_HAVE_FLAG_wd175 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd177
-- Performing Test DEAL_II_HAVE_FLAG_wd177 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd191
-- Performing Test DEAL_II_HAVE_FLAG_wd191 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd193
-- Performing Test DEAL_II_HAVE_FLAG_wd193 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd279
-- Performing Test DEAL_II_HAVE_FLAG_wd279 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd327
-- Performing Test DEAL_II_HAVE_FLAG_wd327 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd383
-- Performing Test DEAL_II_HAVE_FLAG_wd383 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd981
-- Performing Test DEAL_II_HAVE_FLAG_wd981 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd1418
-- Performing Test DEAL_II_HAVE_FLAG_wd1418 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd1478
-- Performing Test DEAL_II_HAVE_FLAG_wd1478 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd1572
-- Performing Test DEAL_II_HAVE_FLAG_wd1572 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd2259
-- Performing Test DEAL_II_HAVE_FLAG_wd2259 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd2536
-- Performing Test DEAL_II_HAVE_FLAG_wd2536 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd2651
-- Performing Test DEAL_II_HAVE_FLAG_wd2651 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd3415
-- Performing Test DEAL_II_HAVE_FLAG_wd3415 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd15531
-- Performing Test DEAL_II_HAVE_FLAG_wd15531 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd111
-- Performing Test DEAL_II_HAVE_FLAG_wd111 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd128
-- Performing Test DEAL_II_HAVE_FLAG_wd128 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd185
-- Performing Test DEAL_II_HAVE_FLAG_wd185 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd186
-- Performing Test DEAL_II_HAVE_FLAG_wd186 - Success
-- Performing Test DEAL_II_HAVE_FLAG_wd280
-- Performing Test DEAL_II_HAVE_FLAG_wd280 - Success
-- Performing Test DEAL_II_HAVE_FLAG_shared_intel
-- Performing Test DEAL_II_HAVE_FLAG_shared_intel - Success
-- Performing Test DEAL_II_HAVE_FLAG_no_ansi_alias
-- Performing Test DEAL_II_HAVE_FLAG_no_ansi_alias - Success
-- Performing Test DEAL_II_HAVE_FLAG_ip
-- Performing Test DEAL_II_HAVE_FLAG_ip - Success
-- Performing Test DEAL_II_HAVE_FLAG_funroll_loops
-- Performing Test DEAL_II_HAVE_FLAG_funroll_loops - Success
-- Performing Test DEAL_II_HAVE_FLAG_g
-- Performing Test DEAL_II_HAVE_FLAG_g - Success
-- Performing Test DEAL_II_HAVE_FLAG_gdwarf_2
-- Performing Test DEAL_II_HAVE_FLAG_gdwarf_2 - Success
-- Performing Test DEAL_II_HAVE_FLAG_grecord_gcc_switches
-- Performing Test DEAL_II_HAVE_FLAG_grecord_gcc_switches - Success
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/bundled/setup_bundled.cmake
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/checks/check_01_cpu_features.cmake
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Performing Test DEAL_II_HAVE_SSE2
-- Performing Test DEAL_II_HAVE_SSE2 - Success
-- Performing Test DEAL_II_HAVE_AVX
-- Performing Test DEAL_II_HAVE_AVX - Success
-- Performing Test DEAL_II_HAVE_AVX512
-- Performing Test DEAL_II_HAVE_AVX512 - Success
-- Performing Test DEAL_II_HAVE_ALTIVEC
-- Performing Test DEAL_II_HAVE_ALTIVEC - Failed
-- Performing Test DEAL_II_HAVE_OPENMP_SIMD
-- Performing Test DEAL_II_HAVE_OPENMP_SIMD - Success
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/checks/check_01_cxx_features.cmake
-- Performing Test DEAL_II_HAVE_FLAG_stdcxx14
-- Performing Test DEAL_II_HAVE_FLAG_stdcxx14 - Success
-- Performing Test DEAL_II_HAVE_CXX14_MAKE_UNIQUE
-- Performing Test DEAL_II_HAVE_CXX14_MAKE_UNIQUE - Success
-- Performing Test DEAL_II_HAVE_CXX14_CONSTEXPR_STDMAXMIN
-- Performing Test DEAL_II_HAVE_CXX14_CONSTEXPR_STDMAXMIN - Success
-- Performing Test DEAL_II_HAVE_CXX14_CLANGAUTODEBUG_BUG_OK
-- Performing Test DEAL_II_HAVE_CXX14_CLANGAUTODEBUG_BUG_OK - Success
-- Performing Test DEAL_II_HAVE_CXX11_FEATURES
-- Performing Test DEAL_II_HAVE_CXX11_FEATURES - Success
-- Performing Test DEAL_II_HAVE_CXX11_FUNCTIONAL_LLVMBUG20084_OK
-- Performing Test DEAL_II_HAVE_CXX11_FUNCTIONAL_LLVMBUG20084_OK - Success
-- Performing Test DEAL_II_HAVE_CXX11_MACOSXC99BUG_OK
-- Performing Test DEAL_II_HAVE_CXX11_MACOSXC99BUG_OK - Success
-- Performing Test DEAL_II_HAVE_CXX11_ICCNUMERICLIMITSBUG_OK
-- Performing Test DEAL_II_HAVE_CXX11_ICCNUMERICLIMITSBUG_OK - Success
-- Performing Test DEAL_II_HAVE_CXX11_ICCLIBSTDCPP47CXX11BUG_OK
-- Performing Test DEAL_II_HAVE_CXX11_ICCLIBSTDCPP47CXX11BUG_OK - Success
-- Performing Test DEAL_II_COMPILER_DEFAULTS_TO_CXX11_OR_NEWER
-- Performing Test DEAL_II_COMPILER_DEFAULTS_TO_CXX11_OR_NEWER - Success
-- DEAL_II_WITH_CXX14 successfully set up
-- Performing Test DEAL_II_HAVE_CXX17_ATTRIBUTE_FALLTHROUGH
-- Performing Test DEAL_II_HAVE_CXX17_ATTRIBUTE_FALLTHROUGH - Failed
-- Performing Test DEAL_II_HAVE_ATTRIBUTE_FALLTHROUGH
-- Performing Test DEAL_II_HAVE_ATTRIBUTE_FALLTHROUGH - Failed
-- Performing Test DEAL_II_HAVE_CXX11_IS_TRIVIALLY_COPYABLE
-- Performing Test DEAL_II_HAVE_CXX11_IS_TRIVIALLY_COPYABLE - Success
-- Performing Test DEAL_II_HAVE_FP_EXCEPTIONS
-- Performing Test DEAL_II_HAVE_FP_EXCEPTIONS - Success
-- Performing Test DEAL_II_HAVE_COMPLEX_OPERATOR_OVERLOADS
-- Performing Test DEAL_II_HAVE_COMPLEX_OPERATOR_OVERLOADS - Success
-- Performing Test DEAL_II_HAVE_CXX14_CONSTEXPR_CAN_CALL_NONCONSTEXPR
-- Performing Test DEAL_II_HAVE_CXX14_CONSTEXPR_CAN_CALL_NONCONSTEXPR - Success
-- Performing Test DEAL_II_HAVE_CXX17_SPECIAL_MATH_FUNCTIONS
-- Performing Test DEAL_II_HAVE_CXX17_SPECIAL_MATH_FUNCTIONS - Failed
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/checks/check_02_compiler_features.cmake
-- Performing Test DEAL_II_COMPILER_USE_VECTOR_ARITHMETICS
-- Performing Test DEAL_II_COMPILER_USE_VECTOR_ARITHMETICS - Success
-- Performing Test DEAL_II_VECTOR_ITERATOR_IS_POINTER_OK
-- Performing Test DEAL_II_VECTOR_ITERATOR_IS_POINTER_OK - Success
-- Test successful, do not define DEAL_II_VECTOR_ITERATOR_IS_POINTER
-- Performing Test DEAL_II_HAVE_BUILTIN_EXPECT
-- Performing Test DEAL_II_HAVE_BUILTIN_EXPECT - Success
-- Performing Test DEAL_II_HAVE_GLIBC_STACKTRACE
-- Performing Test DEAL_II_HAVE_GLIBC_STACKTRACE - Success
-- Performing Test DEAL_II_HAVE_FLAG_rdynamic
-- Performing Test DEAL_II_HAVE_FLAG_rdynamic - Success
-- Performing Test DEAL_II_HAVE_LIBSTDCXX_DEMANGLER
-- Performing Test DEAL_II_HAVE_LIBSTDCXX_DEMANGLER - Success
-- Performing Test DEAL_II_COMPILER_HAS_ATTRIBUTE_PRETTY_FUNCTION
-- Performing Test DEAL_II_COMPILER_HAS_ATTRIBUTE_PRETTY_FUNCTION - Success
-- Performing Test DEAL_II_COMPILER_HAS_CXX14_ATTRIBUTE_DEPRECATED
-- Performing Test DEAL_II_COMPILER_HAS_CXX14_ATTRIBUTE_DEPRECATED - Success
-- Performing Test DEAL_II_COMPILER_HAS_ATTRIBUTE_DEPRECATED
-- Performing Test DEAL_II_COMPILER_HAS_ATTRIBUTE_DEPRECATED - Failed
-- Performing Test DEAL_II_COMPILER_HAS_ATTRIBUTE_ALWAYS_INLINE
-- Performing Test DEAL_II_COMPILER_HAS_ATTRIBUTE_ALWAYS_INLINE - Success
-- Performing Test DEAL_II_COMPILER_HAS_RESTRICT_KEYWORD
-- Performing Test DEAL_II_COMPILER_HAS_RESTRICT_KEYWORD - Success
-- Performing Test DEAL_II_COMPILER_HAS_DIAGNOSTIC_PRAGMA
-- Performing Test DEAL_II_COMPILER_HAS_DIAGNOSTIC_PRAGMA - Success
-- Performing Test DEAL_II_COMPILER_HAS_FUSE_LD_GOLD
-- Performing Test DEAL_II_COMPILER_HAS_FUSE_LD_GOLD - Success
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/checks/check_02_system_features.cmake
-- Looking for C++ include sys/resource.h
-- Looking for C++ include sys/resource.h - found
-- Looking for C++ include unistd.h
-- Looking for C++ include unistd.h - found
-- Looking for gethostname
-- Looking for gethostname - found
-- Looking for getpid
-- Looking for getpid - found
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/checks/check_03_compiler_bugs.cmake
-- Performing Test DEAL_II_TEMPL_SPEC_FRIEND_BUG_OK
-- Performing Test DEAL_II_TEMPL_SPEC_FRIEND_BUG_OK - Success
-- Test successful, do not define DEAL_II_TEMPL_SPEC_FRIEND_BUG
-- Performing Test DEAL_II_MEMBER_ARRAY_SPECIALIZATION_BUG_OK
-- Performing Test DEAL_II_MEMBER_ARRAY_SPECIALIZATION_BUG_OK - Success
-- Test successful, do not define DEAL_II_MEMBER_ARRAY_SPECIALIZATION_BUG
-- Performing Test DEAL_II_CONST_MEMBER_DEDUCTION_BUG_OK
-- Performing Test DEAL_II_CONST_MEMBER_DEDUCTION_BUG_OK - Success
-- Test successful, do not define DEAL_II_CONST_MEMBER_DEDUCTION_BUG
-- Performing Test DEAL_II_BIND_NO_CONST_OP_PARENTHESES_OK
-- Performing Test DEAL_II_BIND_NO_CONST_OP_PARENTHESES_OK - Success
-- Test successful, do not define DEAL_II_BIND_NO_CONST_OP_PARENTHESES
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_1_cuda.cmake
-- DEAL_II_WITH_CUDA is set to off.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_1_lapack.cmake
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - found
-- Found BLAS:
/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_lp64.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_thread.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_core.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/lib/intel64/libiomp5.so
-- Looking for Fortran cheev
-- Looking for Fortran cheev - found
-- A library with LAPACK API found.
-- Performing Test mpifort_LIBRARY
-- Performing Test mpifort_LIBRARY - Success
-- Performing Test mpi_LIBRARY
-- Performing Test mpi_LIBRARY - Success
-- Performing Test ifport_LIBRARY
-- Performing Test ifport_LIBRARY - Success
-- Performing Test ifcoremt_LIBRARY
-- Performing Test ifcoremt_LIBRARY - Success
-- Performing Test imf_LIBRARY
-- Performing Test imf_LIBRARY - Success
-- Performing Test svml_LIBRARY
-- Performing Test svml_LIBRARY - Success
-- Performing Test m_LIBRARY
-- Performing Test m_LIBRARY - Success
-- Performing Test ipgo_LIBRARY
-- Performing Test ipgo_LIBRARY - Success
-- Performing Test irc_LIBRARY
-- Performing Test irc_LIBRARY - Success
-- Performing Test pthread_LIBRARY
-- Performing Test pthread_LIBRARY - Success
-- Performing Test c_LIBRARY
-- Performing Test c_LIBRARY - Success
-- Performing Test gcc_LIBRARY
-- Performing Test gcc_LIBRARY - Success
-- Performing Test gcc_s_LIBRARY
-- Performing Test gcc_s_LIBRARY - Success
-- Performing Test irc_s_LIBRARY
-- Performing Test irc_s_LIBRARY - Success
-- Performing Test dl_LIBRARY
-- Performing Test dl_LIBRARY - Success
-- LAPACK_LIBRARIES:
/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_lapack.a;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_lp64.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_thread.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_core.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/lib/intel64/libiomp5.so;-lpthread;-lm;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_lp64.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_thread.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_core.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/lib/intel64/libiomp5.so;mpifort;mpi;ifport;ifcoremt;imf;svml;m;ipgo;irc;pthread;svml;c;gcc;gcc_s;irc_s;dl;c
-- LAPACK_LINKER_FLAGS:
-- Found LAPACK
-- Performing Test DEAL_II_HAVE_FLAG_pthread
-- Performing Test DEAL_II_HAVE_FLAG_pthread - Success
-- Performing Test LAPACK_SYMBOL_CHECK
-- Performing Test LAPACK_SYMBOL_CHECK - Success
-- Performing Test MKL_SYMBOL_CHECK
-- Performing Test MKL_SYMBOL_CHECK - Success
-- Use Intel MKL for BLAS/LAPACK.
-- DEAL_II_WITH_LAPACK successfully set up with external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_1_mpi.cmake
-- Found MPI_C:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpicc
(found version "3.1")
-- Found MPI_CXX:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpicxx
(found version "3.1")
-- Found MPI_Fortran:
/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/bin/mpif90
(found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Performing Test MPI_HAVE_MPI_SEEK_SET
-- Performing Test MPI_HAVE_MPI_SEEK_SET - Success
-- MPI_MPI_H not found! Call:
-- FIND_FILE(MPI_MPI_H NAMES mpi.h HINTS)
-- MPI_VERSION: 3.1
-- MPI_LIBRARIES:
-- MPI_INCLUDE_DIRS:
-- MPI_USER_INCLUDE_DIRS:
-- MPI_CXX_FLAGS:
-- MPI_LINKER_FLAGS:
-- Found MPI
-- Performing Test MPI_WORKING_COMPILER
-- Performing Test MPI_WORKING_COMPILER - Success
-- DEAL_II_WITH_MPI successfully set up with external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_1_threads.cmake
-- Found TBB_LIBRARY
-- Found TBB_DEBUG_LIBRARY
-- Found TBB_INCLUDE_DIR
-- TBB_VERSION: 9.0
-- TBB_LIBRARIES:
debug;/gpfs/software/juwels/stages/2018b/software/tbb/2019.0.117/tbb/lib/libtbb_debug.so;optimized;/gpfs/software/juwels/stages/2018b/software/tbb/2019.0.117/tbb/lib/libtbb.so
-- TBB_INCLUDE_DIRS:
/gpfs/software/juwels/stages/2018b/software/tbb/2019.0.117/tbb/include
-- TBB_USER_INCLUDE_DIRS:
/gpfs/software/juwels/stages/2018b/software/tbb/2019.0.117/tbb/include
-- Found TBB
-- Performing Test DEAL_II_HAVE_MT_POSIX_BARRIERS
-- Performing Test DEAL_II_HAVE_MT_POSIX_BARRIERS - Success
-- DEAL_II_WITH_THREADS successfully set up with external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_1_zlib.cmake
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.7")
-- ZLIB_VERSION: 1.2.7
-- ZLIB_LIBRARIES: /usr/lib64/libz.so
-- ZLIB_INCLUDE_DIRS: /usr/include
-- Found ZLIB
-- DEAL_II_WITH_ZLIB successfully set up with external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_2_boost.cmake
-- Could NOT find Boost
-- BOOST_LIBRARIES: *** Required variable "Boost_LIBRARIES" empty ***
-- BOOST_INCLUDE_DIRS: *** Required variable "Boost_INCLUDE_DIRS" set to
NOTFOUND ***
-- BOOST_USER_INCLUDE_DIRS: *** Required variable "Boost_INCLUDE_DIRS" set to
NOTFOUND ***
-- Could NOT find BOOST
-- DEAL_II_WITH_BOOST has unmet external dependencies.
-- Performing Test rt_LIBRARY
-- Performing Test rt_LIBRARY - Success
-- Performing Test DEAL_II_HAS_AUTO_PTR
-- Performing Test DEAL_II_HAS_AUTO_PTR - Success
-- Performing Test DEAL_II_HAVE_FLAG_Wno_unused_local_typedefs
-- Performing Test DEAL_II_HAVE_FLAG_Wno_unused_local_typedefs - Failed
-- DEAL_II_WITH_BOOST successfully set up with bundled packages.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_2_cuda_aware_mpi.cmake
-- DEAL_II_WITH_CUDA_AWARE_MPI has unmet configuration requirements:
DEAL_II_WITH_CUDA has to be set to "ON".
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_2_ginkgo.cmake
-- GINKGO_LIBRARY not found! Call:
-- FIND_LIBRARY(GINKGO_LIBRARY NAMES ginkgo HINTS PATH_SUFFIXES lib lib64
lib build/Linux-x86_64/libginkgo)
-- GINKGO_REFERENCE_LIBRARY not found! Call:
-- FIND_LIBRARY(GINKGO_REFERENCE_LIBRARY NAMES ginkgo_reference HINTS
PATH_SUFFIXES lib lib64 lib build/Linux-x86_64/libginkgo_reference)
-- GINKGO_OMP_LIBRARY not found! Call:
-- FIND_LIBRARY(GINKGO_OMP_LIBRARY NAMES ginkgo_omp HINTS PATH_SUFFIXES lib
lib64 lib build/Linux-x86_64/libginkgo_omp)
-- GINKGO_CUDA_LIBRARY not found! Call:
-- FIND_LIBRARY(GINKGO_CUDA_LIBRARY NAMES ginkgo_cuda HINTS PATH_SUFFIXES
lib lib64 lib build/Linux-x86_64/libginkgo_cuda)
-- GINKGO_INCLUDE_DIR not found! Call:
-- FIND_PATH(GINKGO_INCLUDE_DIR ginkgo/ginkgo.hpp HINTS PATH_SUFFIXES
include)
-- GINKGO_LIBRARIES: *** Required variable "GINKGO_LIBRARY" set to NOTFOUND
***
-- GINKGO_INCLUDE_DIRS: *** Required variable "GINKGO_INCLUDE_DIR" set to
NOTFOUND ***
-- GINKGO_USER_INCLUDE_DIRS: *** Required variable "GINKGO_INCLUDE_DIR" set
to NOTFOUND ***
-- Could NOT find GINKGO
-- DEAL_II_WITH_GINKGO has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_2_metis.cmake
-- METIS_LIBRARY not found! Call:
-- FIND_LIBRARY(METIS_LIBRARY NAMES metis HINTS PATH_SUFFIXES lib lib64 lib
build/Linux-x86_64/libmetis)
-- METIS_INCLUDE_DIR not found! Call:
-- FIND_PATH(METIS_INCLUDE_DIR metis.h HINTS PATH_SUFFIXES metis
include/metis include)
-- METIS_LIBRARIES: *** Required variable "METIS_LIBRARY" set to NOTFOUND ***
-- METIS_INCLUDE_DIRS: *** Required variable "METIS_INCLUDE_DIR" set to
NOTFOUND ***
-- METIS_USER_INCLUDE_DIRS: *** Required variable "METIS_INCLUDE_DIR" set to
NOTFOUND ***
-- Could NOT find METIS
-- DEAL_II_WITH_METIS has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_2_trilinos.cmake
-- EPETRA_CONFIG_H not found! Call:
-- FIND_FILE(EPETRA_CONFIG_H Epetra_config.h HINTS NO_DEFAULT_PATH
NO_CMAKE_ENVIRONMENT_PATH NO_CMAKE_PATH NO_SYSTEM_ENVIRONMENT_PATH
NO_CMAKE_SYSTEM_PATH NO_CMAKE_FIND_ROOT_PATH)
-- TRILINOS_LIBRARIES:
-- TRILINOS_INCLUDE_DIRS: *** Required variable "Trilinos_INCLUDE_DIRS" empty
***
-- TRILINOS_USER_INCLUDE_DIRS: *** Required variable "Trilinos_INCLUDE_DIRS"
empty ***
-- TRILINOS_LINKER_FLAGS:
-- Could NOT find TRILINOS
-- DEAL_II_WITH_TRILINOS has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_2_umfpack.cmake
-- UMFPACK_INCLUDE_DIR not found! Call:
-- FIND_PATH(UMFPACK_INCLUDE_DIR umfpack.h HINTS /UMFPACK /../UMFPACK
/UMFPACK PATH_SUFFIXES umfpack include/umfpack include Include UMFPACK/Include
suitesparse)
-- AMD_INCLUDE_DIR not found! Call:
-- FIND_PATH(AMD_INCLUDE_DIR amd.h HINTS /AMD /../AMD /AMD PATH_SUFFIXES
amd include/amd include Include AMD/Include suitesparse)
-- UMFPACK_LIBRARY not found! Call:
-- FIND_LIBRARY(UMFPACK_LIBRARY NAMES umfpack libumfpack HINTS /UMFPACK
/../UMFPACK /UMFPACK PATH_SUFFIXES lib lib64 lib Lib UMFPACK/Lib)
-- AMD_LIBRARY not found! Call:
-- FIND_LIBRARY(AMD_LIBRARY NAMES amd libamd HINTS /AMD /../AMD /AMD
PATH_SUFFIXES lib lib64 lib Lib AMD/Lib)
-- CHOLMOD_LIBRARY not found! Call:
-- FIND_LIBRARY(CHOLMOD_LIBRARY NAMES cholmod libcholmod HINTS /CHOLMOD
/../CHOLMOD /CHOLMOD PATH_SUFFIXES lib lib64 lib Lib CHOLMOD/Lib)
-- COLAMD_LIBRARY not found! Call:
-- FIND_LIBRARY(COLAMD_LIBRARY NAMES colamd libcolamd HINTS /COLAMD
/../COLAMD /COLAMD PATH_SUFFIXES lib lib64 lib Lib COLAMD/Lib)
-- CCOLAMD_LIBRARY not found! Call:
-- FIND_LIBRARY(CCOLAMD_LIBRARY NAMES ccolamd libccolamd HINTS /CCOLAMD
/../CCOLAMD /CCOLAMD PATH_SUFFIXES lib lib64 lib Lib CCOLAMD/Lib)
-- CAMD_LIBRARY not found! Call:
-- FIND_LIBRARY(CAMD_LIBRARY NAMES camd libcamd HINTS /CAMD /../CAMD /CAMD
PATH_SUFFIXES lib lib64 lib Lib CAMD/Lib)
-- SuiteSparse_config_LIBRARY not found! Call:
-- FIND_LIBRARY(SuiteSparse_config_LIBRARY NAMES suitesparseconfig
libsuitesparseconfig HINTS /SuiteSparse_config /../SuiteSparse_config
/SuiteSparse_config PATH_SUFFIXES lib lib64 lib Lib SuiteSparse_config/Lib)
-- UMFPACK_LIBRARIES: *** Required variable "UMFPACK_LIBRARY" set to NOTFOUND
***
-- UMFPACK_INCLUDE_DIRS: *** Required variable "UMFPACK_INCLUDE_DIR" set to
NOTFOUND ***
-- UMFPACK_USER_INCLUDE_DIRS: *** Required variable "UMFPACK_INCLUDE_DIR" set
to NOTFOUND ***
-- UMFPACK_LINKER_FLAGS:
-- Could NOT find UMFPACK
-- DEAL_II_WITH_UMFPACK has unmet external dependencies.
-- DEAL_II_WITH_UMFPACK successfully set up with bundled packages.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_3_petsc.cmake
-- Found PETSC_LIBRARY
-- Found PETSC_INCLUDE_DIR_ARCH
-- Found PETSC_INCLUDE_DIR_COMMON
-- Found PETSC_PETSCVARIABLES
-- Found PETSC_LIBRARY_HYPRE
-- Found PETSC_LIBRARY_mpicxx
-- Found PETSC_LIBRARY_mkl_intel_lp64
-- Found PETSC_LIBRARY_mkl_sequential
-- Found PETSC_LIBRARY_mkl_core
-- Performing Test PETSC_LIBRARY_pthread
-- Performing Test PETSC_LIBRARY_pthread - Success
-- Found PETSC_LIBRARY_hwloc
-- Found PETSC_LIBRARY_ssl
-- Found PETSC_LIBRARY_crypto
-- Found PETSC_LIBRARY_mpifort
-- Found PETSC_LIBRARY_ifport
-- Found PETSC_LIBRARY_ifcoremt_pic
-- Found PETSC_LIBRARY_mpicxx
-- Performing Test PETSC_LIBRARY_dl
-- Performing Test PETSC_LIBRARY_dl - Success
-- Found PETSC_LIBRARY_mpi
-- Found PETSC_LIBRARY_imf
-- Found PETSC_LIBRARY_svml
-- Found PETSC_LIBRARY_irng
-- Performing Test PETSC_LIBRARY_m
-- Performing Test PETSC_LIBRARY_m - Success
-- Found PETSC_LIBRARY_ipgo
-- Found PETSC_LIBRARY_decimal
-- Found PETSC_LIBRARY_cilkrts
-- Found PETSC_LIBRARY_irc
-- Found PETSC_LIBRARY_irc_s
-- PETSC_VERSION: 3.7.6.0
-- PETSC_LIBRARIES:
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/lib/libpetsc.so;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/lib/libHYPRE.a;/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/lib/libmpicxx.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_lp64.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_sequential.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_core.so;pthread;/gpfs/software/juwels/stages/2018b/software/hwloc/1.11.11-GCCcore-7.3.0/lib/libhwloc.so;/usr/lib64/libssl.so;/usr/lib64/libcrypto.so;/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/lib/libmpifort.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libifport.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libifcoremt_pic.a;pthread;/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/lib/libmpicxx.so;dl;/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/lib/libmpi.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libimf.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libsvml.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libirng.so;m;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libipgo.a;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libdecimal.a;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libcilkrts.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libirc.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libirc_s.a;dl
-- PETSC_INCLUDE_DIRS:
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include
-- PETSC_USER_INCLUDE_DIRS:
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/include
-- Found PETSC
-- DEAL_II_WITH_PETSC successfully set up with external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_adolc.cmake
-- ADOLC_INCLUDE_DIR not found! Call:
-- FIND_PATH(ADOLC_INCLUDE_DIR NAMES adolc/adolc.h HINTS PATH_SUFFIXES
include)
-- ADOLC_LIBRARY not found! Call:
-- FIND_LIBRARY(ADOLC_LIBRARY NAMES adolc HINTS PATH_SUFFIXES lib lib64 lib)
-- ADOLC_SETTINGS_H not found! Call:
-- FIND_FILE(ADOLC_SETTINGS_H adolc_settings.h HINTS
ADOLC_INCLUDE_DIR-NOTFOUND ADOLC_INCLUDE_DIR-NOTFOUND/adolc/internal
NO_DEFAULT_PATH NO_CMAKE_ENVIRONMENT_PATH NO_CMAKE_PATH
NO_SYSTEM_ENVIRONMENT_PATH NO_CMAKE_SYSTEM_PATH NO_CMAKE_FIND_ROOT_PATH)
-- ADOLC_LIBRARIES: *** Required variable "ADOLC_LIBRARY" set to NOTFOUND ***
-- ADOLC_INCLUDE_DIRS: *** Required variable "ADOLC_INCLUDE_DIR" set to
NOTFOUND ***
-- ADOLC_USER_INCLUDE_DIRS: *** Required variable "ADOLC_INCLUDE_DIR" set to
NOTFOUND ***
-- Could NOT find ADOLC
-- DEAL_II_WITH_ADOLC has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_arpack.cmake
-- ARPACK_LIBRARY not found! Call:
-- FIND_LIBRARY(ARPACK_LIBRARY NAMES arpack HINTS PATH_SUFFIXES lib lib64
lib)
-- PARPACK_LIBRARY not found! Call:
-- FIND_LIBRARY(PARPACK_LIBRARY NAMES parpack HINTS NO_DEFAULT_PATH
NO_CMAKE_ENVIRONMENT_PATH NO_CMAKE_PATH NO_SYSTEM_ENVIRONMENT_PATH
NO_CMAKE_SYSTEM_PATH NO_CMAKE_FIND_ROOT_PATH)
-- ARPACK_LIBRARIES: *** Required variable "ARPACK_LIBRARY" set to NOTFOUND
***
-- ARPACK_LINKER_FLAGS:
-- Could NOT find ARPACK
-- DEAL_II_WITH_ARPACK has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_assimp.cmake
-- ASSIMP_LIB not found! Call:
-- FIND_LIBRARY(ASSIMP_LIB NAMES assimp HINTS PATH_SUFFIXES lib lib64 lib)
-- ASSIMP_INC not found! Call:
-- FIND_PATH(ASSIMP_INC assimp/defs.h HINTS PATH_SUFFIXES include)
-- ASSIMP_LIBRARIES: *** Required variable "ASSIMP_LIB" set to NOTFOUND ***
-- ASSIMP_INCLUDE_DIRS: *** Required variable "ASSIMP_INC" set to NOTFOUND ***
-- ASSIMP_USER_INCLUDE_DIRS: *** Required variable "ASSIMP_INC" set to
NOTFOUND ***
-- Could NOT find ASSIMP
-- DEAL_II_WITH_ASSIMP has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_complex_values.cmake
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_gmsh.cmake
-- GMSH_EXE not found! Call:
-- FIND_PROGRAM(GMSH_EXE gmsh HINTS PATH_SUFFIXES bin)
-- GMSH_EXECUTABLE: *** Required variable "GMSH_EXE" set to NOTFOUND ***
-- Could NOT find GMSH
-- DEAL_II_WITH_GMSH has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_gsl.cmake
-- GSL_LIBRARY not found! Call:
-- FIND_LIBRARY(GSL_LIBRARY NAMES gsl HINTS PATH_SUFFIXES lib lib64 lib)
-- GSL_CBLAS_LIBRARY not found! Call:
-- FIND_LIBRARY(GSL_CBLAS_LIBRARY NAMES gslcblas cblas refcblas HINTS
PATH_SUFFIXES lib lib64 lib)
-- GSL_INCLUDE_DIR not found! Call:
-- FIND_PATH(GSL_INCLUDE_DIR gsl/gsl_version.h HINTS PATH_SUFFIXES include)
-- GSL_LIBRARIES: *** Required variable "GSL_LIBRARY" set to NOTFOUND ***
-- GSL_INCLUDE_DIRS: *** Required variable "GSL_INCLUDE_DIR" set to NOTFOUND
***
-- GSL_USER_INCLUDE_DIRS: *** Required variable "GSL_INCLUDE_DIR" set to
NOTFOUND ***
-- Could NOT find GSL
-- DEAL_II_WITH_GSL has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_hdf5.cmake
-- HDF5_INCLUDE_DIR not found! Call:
-- FIND_PATH(HDF5_INCLUDE_DIR hdf5.h HINTS PATH_SUFFIXES hdf5 hdf5/include
include/hdf5 include)
-- HDF5_LIBRARY not found! Call:
-- FIND_LIBRARY(HDF5_LIBRARY NAMES hdf5 HINTS PATH_SUFFIXES hdf5/lib lib
lib64 lib)
-- HDF5_HL_LIBRARY not found! Call:
-- FIND_LIBRARY(HDF5_HL_LIBRARY NAMES hdf5_hl HINTS PATH_SUFFIXES lib lib64
lib)
-- HDF5_PUBCONF not found! Call:
-- FIND_FILE(HDF5_PUBCONF NAMES H5pubconf.h H5pubconf-64.h HINTS
HDF5_INCLUDE_DIR-NOTFOUND PATH_SUFFIXES hdf5 hdf5/include include/hdf5 include)
-- HDF5_LIBRARIES: *** Required variable "HDF5_HL_LIBRARY" set to NOTFOUND ***
-- HDF5_INCLUDE_DIRS: *** Required variable "HDF5_INCLUDE_DIR" set to
NOTFOUND ***
-- HDF5_USER_INCLUDE_DIRS: *** Required variable "HDF5_INCLUDE_DIR" set to
NOTFOUND ***
-- Could NOT find HDF5
-- DEAL_II_WITH_HDF5 has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_muparser.cmake
-- MUPARSER_LIBRARY not found! Call:
-- FIND_LIBRARY(MUPARSER_LIBRARY NAMES muparser muparserd HINTS
PATH_SUFFIXES lib lib64 lib)
-- MUPARSER_INCLUDE_DIR not found! Call:
-- FIND_PATH(MUPARSER_INCLUDE_DIR muParserDef.h HINTS PATH_SUFFIXES include)
-- MUPARSER_LIBRARIES: *** Required variable "MUPARSER_LIBRARY" set to
NOTFOUND ***
-- MUPARSER_INCLUDE_DIRS: *** Required variable "MUPARSER_INCLUDE_DIR" set to
NOTFOUND ***
-- Could NOT find MUPARSER
-- DEAL_II_WITH_MUPARSER has unmet external dependencies.
-- DEAL_II_WITH_MUPARSER successfully set up with bundled packages.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_nanoflann.cmake
-- NANOFLANN_INCLUDE_DIR not found! Call:
-- FIND_PATH(NANOFLANN_INCLUDE_DIR nanoflann.hpp HINTS PATH_SUFFIXES
include)
-- NANOFLANN_INCLUDE_DIRS: *** Required variable "NANOFLANN_INCLUDE_DIR" set
to NOTFOUND ***
-- NANOFLANN_USER_INCLUDE_DIRS: *** Required variable "NANOFLANN_INCLUDE_DIR"
set to NOTFOUND ***
-- Could NOT find NANOFLANN
-- DEAL_II_WITH_NANOFLANN has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_netcdf.cmake
-- NETCDF_INCLUDE_DIR not found! Call:
-- FIND_PATH(NETCDF_INCLUDE_DIR netcdfcpp.h HINTS PATH_SUFFIXES netcdf
include)
-- NETCDF_CPLUSPLUS_LIBRARY not found! Call:
-- FIND_LIBRARY(NETCDF_CPLUSPLUS_LIBRARY NAMES netcdf_c++ netcdf_cpp HINTS
PATH_SUFFIXES lib lib64 lib)
-- NETCDF_C_LIBRARY not found! Call:
-- FIND_LIBRARY(NETCDF_C_LIBRARY NAMES netcdf HINTS PATH_SUFFIXES lib lib64
lib)
-- NETCDF_LIBRARIES: *** Required variable "NETCDF_CPLUSPLUS_LIBRARY" set to
NOTFOUND ***
-- NETCDF_INCLUDE_DIRS: *** Required variable "NETCDF_INCLUDE_DIR" set to
NOTFOUND ***
-- Could NOT find NETCDF
-- DEAL_II_WITH_NETCDF has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_opencascade.cmake
-- OPENCASCADE_INCLUDE_DIR not found! Call:
-- FIND_PATH(OPENCASCADE_INCLUDE_DIR Standard_Version.hxx HINTS
PATH_SUFFIXES include include/oce include/opencascade inc)
-- OPENCASCADE_TKBO not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKBO NAMES TKBO HINTS PATH_SUFFIXES lib lib64
lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKBool not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKBool NAMES TKBool HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKBRep not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKBRep NAMES TKBRep HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKernel not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKernel NAMES TKernel HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKFeat not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKFeat NAMES TKFeat HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKFillet not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKFillet NAMES TKFillet HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKG2d not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKG2d NAMES TKG2d HINTS PATH_SUFFIXES lib lib64
lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKG3d not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKG3d NAMES TKG3d HINTS PATH_SUFFIXES lib lib64
lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKGeomAlgo not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKGeomAlgo NAMES TKGeomAlgo HINTS PATH_SUFFIXES
lib lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKGeomBase not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKGeomBase NAMES TKGeomBase HINTS PATH_SUFFIXES
lib lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKHLR not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKHLR NAMES TKHLR HINTS PATH_SUFFIXES lib lib64
lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKIGES not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKIGES NAMES TKIGES HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKMath not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKMath NAMES TKMath HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKMesh not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKMesh NAMES TKMesh HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKOffset not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKOffset NAMES TKOffset HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKPrim not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKPrim NAMES TKPrim HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKShHealing not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKShHealing NAMES TKShHealing HINTS
PATH_SUFFIXES lib lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib
lin32/gcc/lib)
-- OPENCASCADE_TKSTEP not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKSTEP NAMES TKSTEP HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKSTEPAttr not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKSTEPAttr NAMES TKSTEPAttr HINTS PATH_SUFFIXES
lib lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKSTEPBase not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKSTEPBase NAMES TKSTEPBase HINTS PATH_SUFFIXES
lib lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKSTEP209 not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKSTEP209 NAMES TKSTEP209 HINTS PATH_SUFFIXES
lib lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKSTL not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKSTL NAMES TKSTL HINTS PATH_SUFFIXES lib lib64
lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKTopAlgo not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKTopAlgo NAMES TKTopAlgo HINTS PATH_SUFFIXES
lib lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_TKXSBase not found! Call:
-- FIND_LIBRARY(OPENCASCADE_TKXSBase NAMES TKXSBase HINTS PATH_SUFFIXES lib
lib64 lib mac64/clang/lib mac32/clang/lib lin64/gcc/lib lin32/gcc/lib)
-- OPENCASCADE_LIBRARIES: *** Required variable "OPENCASCADE_TKBO" set to
NOTFOUND ***
-- OPENCASCADE_INCLUDE_DIRS: *** Required variable "OPENCASCADE_INCLUDE_DIR"
set to NOTFOUND ***
-- OPENCASCADE_USER_INCLUDE_DIRS: *** Required variable
"OPENCASCADE_INCLUDE_DIR" set to NOTFOUND ***
-- Could NOT find OPENCASCADE
-- DEAL_II_WITH_OPENCASCADE has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_p4est.cmake
-- Found SC_INCLUDE_DIR
-- Found P4EST_LIBRARY_OPTIMIZED
-- Found SC_LIBRARY_OPTIMIZED
-- Found P4EST_LIBRARY_DEBUG
-- Found SC_LIBRARY_DEBUG
-- Found P4EST_INCLUDE_DIR
-- P4EST_VERSION: 2.0
-- P4EST_LIBRARIES:
optimized;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/FAST/lib/libp4est.so;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/FAST/lib/libsc.so;debug;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/DEBUG/lib/libp4est.so;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/DEBUG/lib/libsc.so;general;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_lapack.a;-lpthread;-lm;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_lp64.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_thread.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_core.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/lib/intel64/libiomp5.so;mpifort;mpi;ifport;ifcoremt;imf;m;ipgo;irc;pthread;svml;gcc;gcc_s;irc_s;dl;c
-- P4EST_INCLUDE_DIRS:
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/FAST/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/FAST/include
-- P4EST_USER_INCLUDE_DIRS:
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/FAST/include;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/FAST/include
-- Found P4EST
-- DEAL_II_WITH_P4EST successfully set up with external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_scalapack.cmake
-- SCALAPACK_LIBRARY not found! Call:
-- FIND_LIBRARY(SCALAPACK_LIBRARY NAMES scalapack scalapack-openmpi
scalapack-pvm scalapack-mpi scalapack-mpich scalapack-mpich2 scalapack-lam
HINTS PATH_SUFFIXES lib lib64 lib)
-- SCALAPACK_LIBRARIES: *** Required variable "SCALAPACK_LIBRARY" set to
NOTFOUND ***
-- SCALAPACK_LINKER_FLAGS:
-- Could NOT find SCALAPACK
-- DEAL_II_WITH_SCALAPACK has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_slepc.cmake
-- SLEPC_LIBRARY not found! Call:
-- FIND_LIBRARY(SLEPC_LIBRARY NAMES slepc libslepc HINTS /
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6 PATH_SUFFIXES lib
lib64 lib)
-- SLEPC_INCLUDE_DIR_ARCH not found! Call:
-- FIND_PATH(SLEPC_INCLUDE_DIR_ARCH slepcconf.h HINTS /
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6 PATH_SUFFIXES
slepc include include/slepc)
-- SLEPC_INCLUDE_DIR_COMMON not found! Call:
-- FIND_PATH(SLEPC_INCLUDE_DIR_COMMON slepcversion.h HINTS /
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6 PATH_SUFFIXES
slepc include include/slepc)
-- SLEPC_LIBRARIES: *** Required variable "SLEPC_LIBRARY" set to NOTFOUND ***
-- SLEPC_INCLUDE_DIRS: *** Required variable "SLEPC_INCLUDE_DIR_ARCH" set to
NOTFOUND ***
-- SLEPC_USER_INCLUDE_DIRS: *** Required variable "SLEPC_INCLUDE_DIR_ARCH"
set to NOTFOUND ***
-- Could NOT find SLEPC
-- DEAL_II_WITH_SLEPC has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/configure/configure_sundials.cmake
-- SUNDIALS_LIB_IDAS not found! Call:
-- FIND_LIBRARY(SUNDIALS_LIB_IDAS NAMES sundials_idas HINTS PATH_SUFFIXES
lib lib64 lib)
-- SUNDIALS_LIB_IDA not found! Call:
-- FIND_LIBRARY(SUNDIALS_LIB_IDA NAMES sundials_ida HINTS PATH_SUFFIXES lib
lib64 lib)
-- SUNDIALS_LIB_ARKODE not found! Call:
-- FIND_LIBRARY(SUNDIALS_LIB_ARKODE NAMES sundials_arkode HINTS
PATH_SUFFIXES lib lib64 lib)
-- SUNDIALS_LIB_KINSOL not found! Call:
-- FIND_LIBRARY(SUNDIALS_LIB_KINSOL NAMES sundials_kinsol HINTS
PATH_SUFFIXES lib lib64 lib)
-- SUNDIALS_LIB_SER not found! Call:
-- FIND_LIBRARY(SUNDIALS_LIB_SER NAMES sundials_nvecserial HINTS
PATH_SUFFIXES lib lib64 lib)
-- SUNDIALS_INCLUDE_DIR not found! Call:
-- FIND_PATH(SUNDIALS_INCLUDE_DIR sundials/sundials_nvector.h HINTS
PATH_SUFFIXES include)
-- SUNDIALS_LIB_PAR not found! Call:
-- FIND_LIBRARY(SUNDIALS_LIB_PAR NAMES sundials_nvecparallel HINTS
PATH_SUFFIXES lib lib64 lib)
-- SUNDIALS_LIBRARIES: *** Required variable "SUNDIALS_LIB_IDA" set to
NOTFOUND ***
-- SUNDIALS_INCLUDE_DIRS: *** Required variable "SUNDIALS_INCLUDE_DIR" set to
NOTFOUND ***
-- SUNDIALS_USER_INCLUDE_DIRS: *** Required variable "SUNDIALS_INCLUDE_DIR"
set to NOTFOUND ***
-- Could NOT find SUNDIALS
-- DEAL_II_WITH_SUNDIALS has unmet external dependencies.
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_cpack.cmake
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_custom_targets.cmake
--
-- Include
/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/unpack/deal.II-master/cmake/setup_finalize.cmake
-- Performing Test DEAL_II_HAVE_USABLE_FLAGS_DEBUG
-- Performing Test DEAL_II_HAVE_USABLE_FLAGS_DEBUG - Failed
CMake Error at cmake/setup_finalize.cmake:95 (MESSAGE):
Configuration error: Cannot compile a test program with the final set of
compiler and linker flags:
CXX flags (DEBUG): -fpic -ansi -w2 -diag-disable=remark -wd21 -wd68
-wd135 -wd175 -wd177 -wd191 -wd193 -wd279 -wd327 -wd383 -wd981 -wd1418 -wd1478
-wd1572 -wd2259 -wd2536 -wd2651 -wd3415 -wd15531 -wd111 -wd128 -wd185 -wd186
-wd280 -qopenmp-simd -std=c++14 -xhost -O0 -g -gdwarf-2 -grecord-gcc-switches
LD flags (DEBUG): -Wl,--as-needed -shared-intel -qopenmp -rdynamic
-fuse-ld=gold -pthread
LIBRARIES (DEBUG):
/usr/lib64/libz.so;rt;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/lib/libpetsc.so;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/petsc-3.7.6/lib/libHYPRE.a;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_sequential.so;/gpfs/software/juwels/stages/2018b/software/hwloc/1.11.11-GCCcore-7.3.0/lib/libhwloc.so;/usr/lib64/libssl.so;/usr/lib64/libcrypto.so;/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/lib/libmpifort.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libifport.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libifcoremt_pic.a;/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/lib/libmpicxx.so;/gpfs/software/juwels/stages/2018b/software/psmpi/5.2.1-1-iccifort-2019.0.117-GCC-7.3.0/lib/libmpi.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libimf.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libsvml.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libirng.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libipgo.a;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libdecimal.a;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libcilkrts.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libirc.so;/gpfs/software/juwels/stages/2018b/software/ifort/2019.0.117-GCC-7.3.0/compilers_and_libraries_2019.0.117/linux/compiler/lib/intel64/libirc_s.a;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_lapack.a;-lpthread;-lm;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_lp64.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_intel_thread.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/mkl/lib/intel64/libmkl_core.so;/gpfs/software/juwels/stages/2018b/software/imkl/2019.0.117-ipsmpi-2018b/lib/intel64/libiomp5.so;mpifort;mpi;ifport;ifcoremt;imf;m;ipgo;irc;pthread;svml;gcc;gcc_s;irc_s;dl;c;/gpfs/software/juwels/stages/2018b/software/tbb/2019.0.117/tbb/lib/libtbb_debug.so;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/DEBUG/lib/libp4est.so;/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/p4est-2.0/DEBUG/lib/libsc.so
Call Stack (most recent call first):
cmake/macros/macro_verbose_include.cmake:19 (INCLUDE)
CMakeLists.txt:132 (VERBOSE_INCLUDE)
-- Configuring incomplete, errors occurred!
See also
"/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/build/deal.II-master/CMakeFiles/CMakeOutput.log".
See also
"/p/project/cesmtst/esmtst19/18b_dev_deal.ii-candi/tmp/build/deal.II-master/CMakeFiles/CMakeError.log".
