Hello Bruno,
Thank you for the explanation.
Now I am getting another issue when building cmake :
-- Include
/home/ajbar/Téléchargements/deal.ii-9.4.0/cmake/setup_finalize.cmake
-- Performing Test DEAL_II_HAVE_USABLE_FLAGS_DEBUG
-- Performing Test DEAL_II_HAVE_USABLE_FLAGS_DEBUG - Failed
-- Unable to compile a simple test program. Trying to drop "-fuse-ld=gold"
from the linker flags.
-- Performing Test DEAL_II_HAVE_USABLE_FLAGS_DEBUG
-- Performing Test DEAL_II_HAVE_USABLE_FLAGS_DEBUG - Failed
CMake Error at cmake/setup_finalize.cmake:137 (MESSAGE):
Configuration error: Cannot compile a test program with the final set of
compiler and linker flags:
CXX flags (DEBUG): -pedantic -fPIC -Wall -Wextra -Wmissing-braces
-Woverloaded-virtual -Wpointer-arith -Wsign-compare -Wsuggest-override
-Wswitch -Wsynth -Wwrite-strings -Wno-placement-new
-Wno-deprecated-declarations -Wno-literal-suffix -Wno-psabi
-Wno-class-memaccess -fopenmp-simd -pthread -Wno-unused-local-typedefs -O0
-ggdb -Wa,--compress-debug-sections
LD flags (DEBUG): -rdynamic -lpthread -pthread -ggdb
LIBRARIES (DEBUG):
/usr/lib/x86_64-linux-gnu/openmpi/lib/libopen-pal.so;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;/usr/lib/x86_64-linux-gnu/libboost_serialization.so;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_thread.so;/usr/lib/x86_64-linux-gnu/libboost_regex.so;/usr/lib/x86_64-linux-gnu/libboost_chrono.so;/usr/lib/x86_64-linux-gnu/libboost_date_time.so;/usr/lib/x86_64-linux-gnu/libboost_atomic.so;/usr/lib/x86_64-linux-gnu/libtrilinos_pike-blackbox.so;/usr/lib/x86_64-linux-gnu/libtrilinos_trilinoscouplings.so;/usr/lib/x86_64-linux-gnu/libtrilinos_piro.so;/usr/lib/x86_64-linux-gnu/libtrilinos_rol.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stokhos_muelu.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stokhos_ifpack2.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stokhos_amesos2.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stokhos_tpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stokhos_sacado.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stokhos.so;/usr/lib/x86_64-linux-gnu/libtrilinos_rythmos.so;/usr/lib/x86_64-linux-gnu/libtrilinos_shylu_ddcommon.so;/usr/lib/x86_64-linux-gnu/libtrilinos_shylu_ddfrosch.so;/usr/lib/x86_64-linux-gnu/libtrilinos_muelu-adapters.so;/usr/lib/x86_64-linux-gnu/libtrilinos_muelu-interface.so;/usr/lib/x86_64-linux-gnu/libtrilinos_muelu.so;/usr/lib/x86_64-linux-gnu/libtrilinos_moertel.so;/usr/lib/x86_64-linux-gnu/libtrilinos_locathyra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_locaepetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_localapack.so;/usr/lib/x86_64-linux-gnu/libtrilinos_loca.so;/usr/lib/x86_64-linux-gnu/libtrilinos_noxepetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_noxlapack.so;/usr/lib/x86_64-linux-gnu/libtrilinos_nox.so;/usr/lib/x86_64-linux-gnu/libtrilinos_phalanx.so;/usr/lib/x86_64-linux-gnu/libtrilinos_intrepid2.so;/usr/lib/x86_64-linux-gnu/libtrilinos_intrepid.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teko.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stratimikos.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stratimikosbelos.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stratimikosamesos2.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stratimikosaztecoo.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stratimikosamesos.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stratimikosml.so;/usr/lib/x86_64-linux-gnu/libtrilinos_stratimikosifpack.so;/usr/lib/x86_64-linux-gnu/libtrilinos_ifpack2-adapters.so;/usr/lib/x86_64-linux-gnu/libtrilinos_ifpack2.so;/usr/lib/x86_64-linux-gnu/libtrilinos_anasazitpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_ModeLaplace.so;/usr/lib/x86_64-linux-gnu/libtrilinos_anasaziepetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_anasazi.so;/usr/lib/x86_64-linux-gnu/libtrilinos_komplex.so;/usr/lib/x86_64-linux-gnu/libtrilinos_amesos2.so;/usr/lib/x86_64-linux-gnu/libtrilinos_shylu_nodetacho.so;/usr/lib/x86_64-linux-gnu/libtrilinos_shylu_nodehts.so;/usr/lib/x86_64-linux-gnu/libtrilinos_belosxpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_belostpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_belosepetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_belos.so;/usr/lib/x86_64-linux-gnu/libtrilinos_ml.so;/usr/lib/x86_64-linux-gnu/libtrilinos_ifpack.so;/usr/lib/x86_64-linux-gnu/libtrilinos_zoltan2.so;/usr/lib/x86_64-linux-gnu/libtrilinos_pamgen_extras.so;/usr/lib/x86_64-linux-gnu/libtrilinos_pamgen.so;/usr/lib/x86_64-linux-gnu/libtrilinos_amesos.so;/usr/lib/x86_64-linux-gnu/libtrilinos_galeri-xpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_galeri-epetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_aztecoo.so;/usr/lib/x86_64-linux-gnu/libtrilinos_dpliris.so;/usr/lib/x86_64-linux-gnu/libtrilinos_isorropia.so;/usr/lib/x86_64-linux-gnu/libtrilinos_optipack.so;/usr/lib/x86_64-linux-gnu/libtrilinos_xpetra-sup.so;/usr/lib/x86_64-linux-gnu/libtrilinos_xpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_thyratpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_thyraepetraext.so;/usr/lib/x86_64-linux-gnu/libtrilinos_thyraepetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_thyracore.so;/usr/lib/x86_64-linux-gnu/libtrilinos_epetraext.so;/usr/lib/x86_64-linux-gnu/libtrilinos_trilinosss.so;/usr/lib/x86_64-linux-gnu/libtrilinos_tpetraext.so;/usr/lib/x86_64-linux-gnu/libtrilinos_tpetrainout.so;/usr/lib/x86_64-linux-gnu/libtrilinos_tpetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_kokkostsqr.so;/usr/lib/x86_64-linux-gnu/libtrilinos_tpetraclassiclinalg.so;/usr/lib/x86_64-linux-gnu/libtrilinos_tpetraclassicnodeapi.so;/usr/lib/x86_64-linux-gnu/libtrilinos_tpetraclassic.so;/usr/lib/x86_64-linux-gnu/libtrilinos_triutils.so;/usr/lib/x86_64-linux-gnu/libtrilinos_globipack.so;/usr/lib/x86_64-linux-gnu/libtrilinos_shards.so;/usr/lib/x86_64-linux-gnu/libtrilinos_zoltan.so;/usr/lib/x86_64-linux-gnu/libtrilinos_epetra.so;/usr/lib/x86_64-linux-gnu/libtrilinos_sacado.so;/usr/lib/x86_64-linux-gnu/libtrilinos_rtop.so;/usr/lib/x86_64-linux-gnu/libtrilinos_kokkoskernels.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchoskokkoscomm.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchoskokkoscompat.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchosremainder.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchosnumerics.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchoscomm.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchosparameterlist.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchosparser.so;/usr/lib/x86_64-linux-gnu/libtrilinos_teuchoscore.so;/usr/lib/x86_64-linux-gnu/libtrilinos_kokkosalgorithms.so;/usr/lib/x86_64-linux-gnu/libtrilinos_kokkoscontainers.so;/usr/lib/x86_64-linux-gnu/libtrilinos_kokkoscore.so;/usr/lib/x86_64-linux-gnu/libsmumps.so;/usr/lib/x86_64-linux-gnu/libdmumps.so;/usr/lib/x86_64-linux-gnu/libcmumps.so;/usr/lib/x86_64-linux-gnu/libzmumps.so;/usr/lib/x86_64-linux-gnu/libpord.so;/usr/lib/x86_64-linux-gnu/libmumps_common.so;/usr/lib/x86_64-linux-gnu/libtbb.so;/usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libscotcherr.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/libamd.so;rt;/usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;dl;m;/usr/lib/x86_64-linux-gnu/libscalapack-openmpi.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_usempif08.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_usempi_ignore_tkr.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_mpifh.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;
Call Stack (most recent call first):
cmake/macros/macro_verbose_include.cmake:19 (INCLUDE)
CMakeLists.txt:136 (VERBOSE_INCLUDE)
-- Configuring incomplete, errors occurred!
See also
"/home/ajbar/Téléchargements/deal.ii-9.4.0/build/CMakeFiles/CMakeOutput.log".
See also
"/home/ajbar/Téléchargements/deal.ii-9.4.0/build/CMakeFiles/CMakeError.log".
Could you please help me with that?
Thank you in advanced for your help.
Greetings.
Mahmoud
On Wednesday, July 27, 2022 at 1:04:20 PM UTC+2 [email protected] wrote:
> Mahmoud,
>
> You should add -DDEAL_II_WITH_MPI=ON and -DDEAL_II_WITH_TRILINOS=ON to
> the cmake command. Then, you can compile and install deal.II You should not
> modify deal.IIConfig.cmake (or any other file for that matter). Th cmake
> like should look like:
>
> cmake -DDEAL_II_WITH_MPI_MPI=ON -DDEAL_II_WITH_TRILINOS=ON
> -DCMAKE_INSTALL_PREFIX=/path ..
>
> Best,
>
> Bruno
>
> Le mar. 26 juil. 2022 à 08:07, Mahmoud Ajbar <[email protected]> a écrit :
>
>> Hello Bruno,
>>
>> Thank you for your quick reply.
>> I have downloaded the deal.ii 9.4.0-1ubuntu1 source package in Ubuntu
>> available here :
>> https://launchpad.net/ubuntu/+source/deal.ii/9.4.0-1ubuntu1.
>> I tried to put *ON *both for MPI and Trilinos on the file "
>> *deal.IIConfig.cmake*" which I found on the *build/cmake/config* folder
>> after passing the command "*cmake
>> -DCMAKE_INSTALL_PREFIX=/home/ajbar/deal.ii-9.4.0
>> /home/ajbar/Téléchargements/deal.ii-9.4.0*" and then launch the
>> intallation process, unfortunately, I ended up with the same error message.
>> Could you please inform about the file I should modify to have the
>> correct configuration?
>>
>> Regards,
>>
>> Mahmoud
>>
>> On Monday, July 25, 2022 at 5:45:56 PM UTC+2 [email protected] wrote:
>>
>>> Hello,
>>>
>>> It looks like you installed deal.II in /home/ajbar/Bureau/dealii How did
>>> you configure it? To get the code to compile, you need to reconfigure,
>>> recompile, and reinstall deal.II This time when you configure deal.II, make
>>> sure that the configuration line contains -DDEAL_II_WITH_MPI=ON and
>>> -DDEAL_II_WITH_TRILINOS=ON.
>>>
>>> Best,
>>>
>>> Bruno
>>>
>>> On Monday, July 25, 2022 at 11:35:54 AM UTC-4 [email protected] wrote:
>>>
>>>> Dear Community,
>>>>
>>>> After installing dealii development package in ubuntu, I tried to
>>>> compile a code that requires MPI, Trilinos and Trilinos with Sacado, while
>>>> all these are OFF.
>>>> I have read in the documentation that I should pass the
>>>> -DDEAL_II_WITH_MPI=ON argument to cmake. Could anyone walk me through this
>>>> process please I am new to dealii and ubuntu.
>>>>
>>>> Thank you in advanced for your help.
>>>>
>>>> Greetings
>>>>
>>> --
>> The deal.II project is located at http://www.dealii.org/
>> For mailing list/forum options, see
>> https://groups.google.com/d/forum/dealii?hl=en
>> ---
>> You received this message because you are subscribed to a topic in the
>> Google Groups "deal.II User Group" group.
>> To unsubscribe from this topic, visit
>> https://groups.google.com/d/topic/dealii/a0pXqFwQIS4/unsubscribe.
>> To unsubscribe from this group and all its topics, send an email to
>> [email protected].
>> To view this discussion on the web visit
>> https://groups.google.com/d/msgid/dealii/d01f549d-85d2-41b2-b656-fc9a1dfc78c2n%40googlegroups.com
>>
>> <https://groups.google.com/d/msgid/dealii/d01f549d-85d2-41b2-b656-fc9a1dfc78c2n%40googlegroups.com?utm_medium=email&utm_source=footer>
>> .
>>
>
--
The deal.II project is located at http://www.dealii.org/
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
---
You received this message because you are subscribed to the Google Groups
"deal.II User Group" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to [email protected].
To view this discussion on the web visit
https://groups.google.com/d/msgid/dealii/a5c86105-5725-457c-86a5-a98fc264ac21n%40googlegroups.com.
