Your message dated Thu, 31 Jul 2014 23:34:40 +0000
with message-id <[email protected]>
and subject line Bug#756688: fixed in nexus 4.3.2-svn1921-2
has caused the Debian Bug report #756688,
regarding nexus: [hdf5 transition] please support hdf5 1.8.13 new packaging
layout
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
756688: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=756688
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: nexus
Version: 4.3.2-svn1921-1
Severity: important
Tags: patch
User: [email protected]
Usertags: HDF5-transition
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Hi,
The hdf5 1.8.13 package in experimental features a new layout for
headers and libraries, so that all the binary packages are now
co-installable.
Please find attached a patch proposal to support both the current
and the new layouts.
Because this bug is in the way of the hdf5 transition I intend to NMU
in a few days. I apologize for the urge, and I hope this approach won't
offend you. Please tell me otherwise.
Kind regards,
_g.
- -- System Information:
Debian Release: jessie/sid
APT prefers testing
APT policy: (500, 'testing'), (1, 'experimental')
Architecture: i386 (i686)
Kernel: Linux 3.14-1-486
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
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diff -Nru nexus-4.3.2-svn1921/debian/changelog nexus-4.3.2-svn1921/debian/changelog
--- nexus-4.3.2-svn1921/debian/changelog 2014-04-16 22:08:23.000000000 +0200
+++ nexus-4.3.2-svn1921/debian/changelog 2014-07-25 14:50:53.000000000 +0200
@@ -1,3 +1,10 @@
+nexus (4.3.2-svn1921-1.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Support hdf5 1.8.13 new packaging layout.
+
+ -- Gilles Filippini <[email protected]> Fri, 25 Jul 2014 14:35:37 +0200
+
nexus (4.3.2-svn1921-1) unstable; urgency=low
* disginguish between static and dynamic linking, fix
diff -Nru nexus-4.3.2-svn1921/debian/rules nexus-4.3.2-svn1921/debian/rules
--- nexus-4.3.2-svn1921/debian/rules 2014-04-16 22:00:58.000000000 +0200
+++ nexus-4.3.2-svn1921/debian/rules 2014-07-31 11:11:55.000000000 +0200
@@ -19,6 +19,12 @@
CXXFLAGS:=$(shell dpkg-buildflags --get CXXFLAGS)
LDFLAGS:=$(shell dpkg-buildflags --get LDFLAGS)
+ifneq ($(wildcard /usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial/libhdf5.so),)
+ HDF5_DIR := /usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial
+else
+ HDF5_DIR := /usr
+endif
+
# shared library versions, option 1
#version=2.0.5
#major=2
@@ -41,7 +47,7 @@
ifneq "$(wildcard /usr/share/misc/config.guess)" ""
cp -f /usr/share/misc/config.guess config.guess
endif
- ./configure --host=$(DEB_HOST_GNU_TYPE) --build=$(DEB_BUILD_GNU_TYPE) --prefix=/usr --mandir=\$${prefix}/share/man --infodir=\$${prefix}/share/info --with-hdf5=/usr CFLAGS="$(CFLAGS)" LDFLAGS="$(LDFLAGS) -Wl,-z,defs" CPPFLAGS="$(CPPFLAGS)" CXXFLAGS="$(CXXFLAGS)" --with-java-home=/usr/lib/jvm/default-java --with-python=/usr JAVACFLAGS="-source 1.5 -target 1.5"
+ ./configure --host=$(DEB_HOST_GNU_TYPE) --build=$(DEB_BUILD_GNU_TYPE) --prefix=/usr --mandir=\$${prefix}/share/man --infodir=\$${prefix}/share/info --with-hdf5=$(HDF5_DIR) CFLAGS="$(CFLAGS)" LDFLAGS="$(LDFLAGS) -Wl,-z,defs" CPPFLAGS="$(CPPFLAGS)" CXXFLAGS="$(CXXFLAGS)" --with-java-home=/usr/lib/jvm/default-java --with-python=/usr JAVACFLAGS="-source 1.5 -target 1.5"
sed < libtool > libtool-2 -e 's/^hardcode_libdir_flag_spec.*$$/hardcode_libdir_flag_spec=" -D__LIBTOOL_IS_A_FOOL__ "/' -e '/^archive_cmds="/s/"$$/ \\$$deplibs"/'
mv libtool-2 libtool
chmod 755 libtool
@@ -57,11 +63,11 @@
$(MAKE)
touch $@
-clean: config.status
+clean:
dh_testdir
dh_testroot
rm -f build-stamp
- $(MAKE) maintainer-clean
+ -$(MAKE) maintainer-clean
rm -f config.sub config.guess
rm -fr config || true
rm -fr .pc || true
--- End Message ---
--- Begin Message ---
Source: nexus
Source-Version: 4.3.2-svn1921-2
We believe that the bug you reported is fixed in the latest version of
nexus, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Tobias Stefan Richter <[email protected]> (supplier of updated nexus package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 1 Aug 2014 00:21:53 +0100
Source: nexus
Binary: libnexus0 libnexus0-dev libnexus0-java python-nxs nexus-tools
Architecture: source all amd64
Version: 4.3.2-svn1921-2
Distribution: unstable
Urgency: low
Maintainer: Tobias Stefan Richter <[email protected]>
Changed-By: Tobias Stefan Richter <[email protected]>
Description:
libnexus0 - NeXus scientific data file format - runtime libraries
libnexus0-dev - NeXus scientific data file format - development libraries
libnexus0-java - NeXus scientific data file format - java libraries
nexus-tools - NeXus scientific data file format - applications
python-nxs - NeXus scientific data file format - python binding
Closes: 756688
Changes:
nexus (4.3.2-svn1921-2) unstable; urgency=low
.
* Support hdf5 1.8.13 new packaging layout.
Patch by Gilles Filippini <[email protected]>
(Closes: #756688)
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