Control: tag -1 + patch On Thu, 26 May 2016 23:35:55 +0300, Niko Tyni wrote:
> Package: bioperl > Version: 1.6.924-3 > Severity: important > User: [email protected] > Usertags: perl-5.24-transition > > This package fails to build with Perl 5.24 (currently in experimental): > > # Failed test 'use Bio::Tools::Alignment::Consed;' > # at t/Tools/Alignment/Consed.t line 19. > # Tried to use 'Bio::Tools::Alignment::Consed'. > # Error: Can't redeclare "my" in "my" at Bio/Tools/Alignment/Consed.pm > line 1712, at end of line > # Compilation failed in require at t/Tools/Alignment/Consed.t line 19. > # BEGIN failed--compilation aborted at t/Tools/Alignment/Consed.t line 19. > # Looks like you failed 1 test of 15. > > The corresponding line is > my ($r_source,my $r_destination) = @_; > > and it looks like Perl has become stricter about this particular error, > as documented in > > http://search.cpan.org/~rjbs/perl-5.24.0/pod/perldiag.pod#Can%27t_redeclare_%22%s%22_in_%22%s%22 > This is also https://rt.cpan.org/Public/Bug/Display.html?id=106756 (already forwarded) which points to a patch: http://cpan.cpantesters.org/authors/id/S/SR/SREZIC/patches/BioPerl-1.006924-RT106756.patch I haven't tested it but it is more than trivial :) Cheers, gregor -- .''`. Homepage https://info.comodo.priv.at/ - OpenPGP key 0xBB3A68018649AA06 : :' : Debian GNU/Linux user, admin, and developer - https://www.debian.org/ `. `' Member of VIBE!AT & SPI, fellow of the Free Software Foundation Europe `- NP: Diana Krall: Isn't This A Lovely Day
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