Source: q2cli
Version: 2019.10.0-1
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20200321 ftbfs-bullseye
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> LC_ALL=C.UTF-8 dh_auto_test -- -s custom --test-args='cd {build_dir};
> HOME=/<<PKGBUILDDIR>> QIIMETEST= nosetests3'
> I: pybuild base:217: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build;
> HOME=/<<PKGBUILDDIR>> QIIMETEST= nosetests3
> QIIME is caching your current deployment for improved performance. This may
> take a few moments and should only happen once per deployment.
> F......FF...F..F...F...F..F..F.FF.FFFFF............F....EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
> ======================================================================
> ERROR: test_artifact_no_metadata
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-_52avy2i/0394e4ad-02a8-43f7-ad5e-766f675d10b0/provenance'
>
> ======================================================================
> ERROR: test_artifact_w_metadata
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-yy9djalh/ad3f1b6a-c5aa-4403-b1b0-c0ec9564054e/provenance'
>
> ======================================================================
> ERROR: test_bad_metadata_file (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-qwtd6fwb/cc91b118-abcf-4a77-9571-d6955f85c51e/provenance'
>
> ======================================================================
> ERROR: test_export_dir_format (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-w50wkja1/7befbbbd-0d73-4dfe-ba82-9055c45d3913/provenance'
>
> ======================================================================
> ERROR: test_export_dir_format_nested
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-sr_q_tw0/a7cb8973-444e-4470-9370-02ec102d33bd/provenance'
>
> ======================================================================
> ERROR: test_export_file_format (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-d9vifhdk/ab6b0a5f-c1bc-471b-95cd-0919a1b2ae5e/provenance'
>
> ======================================================================
> ERROR: test_export_path_file_is_replaced
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-_p086m2d/f22dff4a-8700-47f4-946b-17fcf3a5cde8/provenance'
>
> ======================================================================
> ERROR: test_export_to_dir_no_format
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-gc35m6e_/459a38d8-ed63-4794-858e-ed46776d3e95/provenance'
>
> ======================================================================
> ERROR: test_export_to_dir_w_format
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-gs83dkkz/45bce9bc-c196-4386-9f1e-c1e9e6b2020f/provenance'
>
> ======================================================================
> ERROR: test_export_to_dir_without_format_success_message
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-0xy5459z/b785cc3c-234a-4aeb-93ef-ef4197f9dff9/provenance'
>
> ======================================================================
> ERROR: test_export_to_file (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-n1kz6bxc/ff17f19e-099a-4b04-a831-0ea239989fd4/provenance'
>
> ======================================================================
> ERROR: test_export_to_file_creates_directories
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-v3ex5arj/d94a0fb6-eb5f-45dc-a00a-401ec4738ac4/provenance'
>
> ======================================================================
> ERROR: test_export_to_file_with_format_success_message
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-i1x3v0n3/e780182b-8638-45f9-b24e-b39c375b3780/provenance'
>
> ======================================================================
> ERROR: test_export_to_filename_without_path
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-18mmhare/8626bda2-0eae-4587-af5d-33b702356a84/provenance'
>
> ======================================================================
> ERROR: test_export_visualization_to_dir
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-jdl5f7dz/d8486077-1603-4a82-b5cc-3acd6dd2af57/provenance'
>
> ======================================================================
> ERROR: test_export_visualization_to_dir_success_message
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-x1i9evwa/54c60f88-abc1-49f6-9a72-dc78c2222866/provenance'
>
> ======================================================================
> ERROR: test_export_visualization_w_format
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-2pqglmsf/602a7229-d059-443e-a81f-a5669b53c774/provenance'
>
> ======================================================================
> ERROR: test_extract_to_dir_success_message
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-18rk9bo2/ed13aa7f-7b36-4de7-8cc1-9c6a79e25ca8/provenance'
>
> ======================================================================
> ERROR: test_import_from_directory_without_format_success_message
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-d6jd7f5z/5cad6d3f-6060-493f-80f4-a31ca90095b3/provenance'
>
> ======================================================================
> ERROR: test_import_from_file_with_format_success_message
> (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-lvd30h2b/a7c6fb34-3b44-48a9-93fa-c0d7933f5448/provenance'
>
> ======================================================================
> ERROR: test_merged_metadata (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-l_pyqr2k/6875fa56-cc1d-49dc-a8d5-a8ac76a9d6e1/provenance'
>
> ======================================================================
> ERROR: test_metadata_file (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-64q1a70_/f4911d3c-392a-4ff2-ad81-c808d022d2ab/provenance'
>
> ======================================================================
> ERROR: test_tsv (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-5igvltwq/07859504-5042-4626-93ec-0b1b8dc476de/provenance'
>
> ======================================================================
> ERROR: test_visualization (q2cli.tests.test_tools.TestExportToFileFormat)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 283, in setUp
> super().setUp()
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-witgxope/f6a059b4-d3ef-48d5-ba15-0784ba63375d/provenance'
>
> ======================================================================
> ERROR: test_artifact_no_metadata (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-698_sh1g/d8db4d40-d3a2-4079-b56c-47e13cf69073/provenance'
>
> ======================================================================
> ERROR: test_artifact_w_metadata (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-rx4ed_aq/3241c877-f1ea-48ce-9b06-556384531117/provenance'
>
> ======================================================================
> ERROR: test_bad_metadata_file (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-mc2rzd1w/8840f17d-caae-4cdc-a71d-2c6cf12ed2b5/provenance'
>
> ======================================================================
> ERROR: test_export_path_file_is_replaced
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-cbjfjh2k/996c1f77-b74b-4962-a22e-70f64b8acd28/provenance'
>
> ======================================================================
> ERROR: test_export_to_dir_no_format
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-81_33vi_/a66ce8be-0bbf-43c4-8b27-98dd986735dc/provenance'
>
> ======================================================================
> ERROR: test_export_to_dir_w_format
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-kfc4do4c/c084d8eb-fc02-42c9-a470-bd2fe9330e66/provenance'
>
> ======================================================================
> ERROR: test_export_to_dir_without_format_success_message
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-_9tv_aux/6cb7c406-6aa0-4ec4-9ed2-4225ab3deaf3/provenance'
>
> ======================================================================
> ERROR: test_export_to_file (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-i0dmnnaf/a6cb91ef-f0d3-4e50-aade-0f45b480ad44/provenance'
>
> ======================================================================
> ERROR: test_export_to_file_creates_directories
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-3dt9k9sp/ef5737ae-3c68-4ed2-a081-c38417c5f4f2/provenance'
>
> ======================================================================
> ERROR: test_export_to_file_with_format_success_message
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-k3x1dta9/f2df9bf7-6db3-4e3b-a942-80994436468c/provenance'
>
> ======================================================================
> ERROR: test_export_visualization_to_dir
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-pbdjumey/ae0d82fd-3eb7-4165-945f-2ac26dfd42c5/provenance'
>
> ======================================================================
> ERROR: test_export_visualization_to_dir_success_message
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-uxuqz0ou/16f1dd4f-09ba-4198-bf18-69fba4b96ec2/provenance'
>
> ======================================================================
> ERROR: test_export_visualization_w_format
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-7z0nofuz/7b83e47d-9501-41ec-b69c-3381f0654e48/provenance'
>
> ======================================================================
> ERROR: test_extract_to_dir_success_message
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-wt41fi30/f793a12e-5e28-4709-9951-06c4d5483530/provenance'
>
> ======================================================================
> ERROR: test_import_from_directory_without_format_success_message
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-idbt66cy/5fd3c292-55d4-4d29-b989-3680ae7e453a/provenance'
>
> ======================================================================
> ERROR: test_import_from_file_with_format_success_message
> (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-t_dnspc9/026e98cf-7556-4526-8848-8b48818b4d13/provenance'
>
> ======================================================================
> ERROR: test_merged_metadata (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-3witad42/aa313c8d-cc2a-4eb5-b789-09eac06a5233/provenance'
>
> ======================================================================
> ERROR: test_metadata_file (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-ky3fw8d5/1daaed10-7d50-498e-b3ab-a127016f4d5f/provenance'
>
> ======================================================================
> ERROR: test_tsv (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-17vjoaaq/0f7a4bbb-dee1-4d98-9a93-4164ee3f6947/provenance'
>
> ======================================================================
> ERROR: test_visualization (q2cli.tests.test_tools.TestInspectMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_tools.py",
> line 53, in setUp
> self.viz = most_common_viz(ints1).visualization.save(self.viz)
> File "<decorator-gen-44>", line 2, in most_common_viz
> File "/usr/lib/python3/dist-packages/qiime2/sdk/action.py", line 215, in
> bound_callable
> provenance.add_input(name, artifact)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 406, in add_input
> self.inputs[name] = self.add_ancestor(input)
> File "/usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py",
> line 157, in add_ancestor
> shutil.copytree(
> File "/usr/lib/python3.8/shutil.py", line 552, in copytree
> with os.scandir(src) as itr:
> FileNotFoundError: [Errno 2] No such file or directory:
> '/tmp/qiime2-archive-y7edmd14/1119ae4c-84dd-4a86-8093-9278e07aeae2/provenance'
>
> ======================================================================
> FAIL: test_action_parameter_types (q2cli.tests.test_cli.CliTests)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 93, in test_action_parameter_types
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
> -------------------- >> begin captured logging << --------------------
> bibtexparser.bparser: DEBUG: Found Entry: ['Article', 'Bolyen2019', {'url':
> 'https://doi.org/10.1038/s41587-019-0209-9', 'doi':
> '10.1038/s41587-019-0209-9', 'issn': '1546-1696', 'pages': '852-857',
> 'number': '8', 'volume': '37', 'year': '2019', 'journal': 'Nature
> Biotechnology', 'title': 'Reproducible, interactive, scalable and extensible
> microbiome data science using QIIME 2', 'author': "Bolyen, Evan and Rideout,
> Jai Ram and Dillon, Matthew R. and Bokulich, Nicholas A. and Abnet, Christian
> C. and Al-Ghalith, Gabriel A. and Alexander, Harriet and Alm, Eric J. and
> Arumugam, Manimozhiyan and Asnicar, Francesco and Bai, Yang and Bisanz,
> Jordan E. and Bittinger, Kyle and Brejnrod, Asker and Brislawn, Colin J. and
> Brown, C. Titus and Callahan, Benjamin J. and Caraballo-Rodr{\\'i}guez,
> Andr{\\'e}s Mauricio and Chase, John and Cope, Emily K. and Da Silva, Ricardo
> and Diener, Christian and Dorrestein, Pieter C. and Douglas, Gavin M. and
> Durall, Daniel M. and Duvallet, Claire and Edwardson, Christian F. and Ernst,
> Madeleine and Estaki, Mehrbod and Fouquier, Jennifer and Gauglitz, Julia M.
> and Gibbons, Sean M. and Gibson, Deanna L. and Gonzalez, Antonio and Gorlick,
> Kestrel and Guo, Jiarong and Hillmann, Benjamin and Holmes, Susan and Holste,
> Hannes and Huttenhower, Curtis and Huttley, Gavin A. and Janssen, Stefan and
> Jarmusch, Alan K. and Jiang, Lingjing and Kaehler, Benjamin D. and Kang, Kyo
> Bin and Keefe, Christopher R. and Keim, Paul and Kelley, Scott T. and
> Knights, Dan and Koester, Irina and Kosciolek, Tomasz and Kreps, Jorden and
> Langille, Morgan G. I. and Lee, Joslynn and Ley, Ruth and Liu, Yong-Xin and
> Loftfield, Erikka and Lozupone, Catherine and Maher, Massoud and Marotz,
> Clarisse and Martin, Bryan D. and McDonald, Daniel and McIver, Lauren J. and
> Melnik, Alexey V. and Metcalf, Jessica L. and Morgan, Sydney C. and Morton,
> Jamie T. and Naimey, Ahmad Turan and Navas-Molina, Jose A. and Nothias, Louis
> Felix and Orchanian, Stephanie B. and Pearson, Talima and Peoples, Samuel L.
> and Petras, Daniel and Preuss, Mary Lai and Pruesse, Elmar and Rasmussen,
> Lasse Buur and Rivers, Adam and Robeson, Michael S. and Rosenthal, Patrick
> and Segata, Nicola and Shaffer, Michael and Shiffer, Arron and Sinha, Rashmi
> and Song, Se Jin and Spear, John R. and Swafford, Austin D. and Thompson,
> Luke R. and Torres, Pedro J. and Trinh, Pauline and Tripathi, Anupriya and
> Turnbaugh, Peter J. and Ul-Hasan, Sabah and van der Hooft, Justin J. J. and
> Vargas, Fernando and V{\\'a}zquez-Baeza, Yoshiki and Vogtmann, Emily and von
> Hippel, Max and Walters, William and Wan, Yunhu and Wang, Mingxun and Warren,
> Jonathan and Weber, Kyle C. and Williamson, Charles H. D. and Willis, Amy D.
> and Xu, Zhenjiang Zech and Zaneveld, Jesse R. and Zhang, Yilong and Zhu,
> Qiyun and Knight, Rob and Caporaso, J. Gregory"}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'unger1998does',
> {'publisher': 'Wiley Online Library', 'year': '1998', 'pages': '949--950',
> 'number': '5', 'volume': '41', 'journal': 'Arthritis \\& Rheumatology',
> 'author': 'Unger, Donald L', 'title': 'Does knuckle cracking lead to
> arthritis of the fingers?'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'berry1997flying',
> {'publisher': 'IOP Publishing', 'year': '1997', 'pages': '307', 'number':
> '4', 'volume': '18', 'journal': 'European Journal of Physics', 'author':
> 'Berry, Michael Victor and Geim, Andre Konstantin', 'title': 'Of flying frogs
> and levitrons'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'mayer2012walking',
> {'publisher': 'APS', 'year': '2012', 'pages': '046117', 'number': '4',
> 'volume': '85', 'journal': 'Physical Review E', 'author': 'Mayer, Hans C and
> Krechetnikov, Rouslan', 'title': 'Walking with coffee: Why does it spill?'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'baerheim1994effect',
> {'publisher': 'British Medical Journal Publishing Group', 'year': '1994',
> 'pages': '1689', 'number': '6970', 'volume': '309', 'journal': 'BMJ',
> 'author': 'Baerheim, Anders and Sandvik, Hogne', 'title': 'Effect of ale,
> garlic, and soured cream on the appetite of leeches'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'witcombe2006sword',
> {'publisher': 'British Medical Journal Publishing Group', 'year': '2006',
> 'pages': '1285--1287', 'number': '7582', 'volume': '333', 'journal': 'BMJ',
> 'author': 'Witcombe, Brian and Meyer, Dan', 'title': 'Sword swallowing and
> its side effects'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'reimers2012response',
> {'publisher': 'BioOne', 'year': '2012', 'pages': '483--489', 'number': '4',
> 'volume': '44', 'journal': 'Arctic, antarctic, and alpine research',
> 'author': 'Reimers, Eigil and Eftest{\\o}l, Sindre', 'title': 'Response
> behaviors of Svalbard reindeer towards humans and humans disguised as polar
> bears on Edge{\\o}ya'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article',
> 'barbeito1967microbiological', {'publisher': 'Am Soc Microbiol', 'year':
> '1967', 'pages': '899--906', 'number': '4', 'volume': '15', 'journal':
> 'Applied microbiology', 'author': 'Barbeito, Manuel S and Mathews, Charles T
> and Taylor, Larry A', 'title': 'Microbiological laboratory hazard of bearded
> men'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'krauth2012depth',
> {'publisher': 'Public Library of Science', 'year': '2012', 'pages': 'e1969',
> 'number': '12', 'volume': '6', 'journal': 'PLoS neglected tropical diseases',
> 'author': 'Krauth, Stefanie J and Coulibaly, Jean T and Knopp, Stefanie and
> Traor{\\\'e}, Mahamadou and N\'Goran, Eli{\\\'e}zer K and Utzinger,
> J{\\"u}rg', 'title': 'An in-depth analysis of a piece of shit: distribution
> of Schistosoma mansoni and hookworm eggs in human stool'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> bibtexparser.bparser: DEBUG: Found Entry: ['article', 'silvers1997effects',
> {'publisher': 'Taylor \\& Francis', 'year': '1997', 'pages': '217--223',
> 'number': '3', 'volume': '36', 'journal': 'Literacy Research and
> Instruction', 'author': 'Silvers, Vicki L and Kreiner, David S', 'title':
> 'The effects of pre-existing inappropriate highlighting on reading
> comprehension'}]
> bibtexparser.bparser: DEBUG: Apply customizations and return dict
> --------------------- >> end captured logging << ---------------------
>
> ======================================================================
> FAIL: test_qza_extension (q2cli.tests.test_cli.CliTests)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 248, in test_qza_extension
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_qzv_extension (q2cli.tests.test_cli.CliTests)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 269, in test_qzv_extension
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_split_ints (q2cli.tests.test_cli.CliTests)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 167, in test_split_ints
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_variadic_inputs (q2cli.tests.test_cli.CliTests)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 197, in test_variadic_inputs
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_categorical_metadata_column
> (q2cli.tests.test_cli.TestMetadataColumnSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 646, in test_categorical_metadata_column
> self._assertMetadataOutput(
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_numeric_metadata_column
> (q2cli.tests.test_cli.TestMetadataColumnSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 677, in test_numeric_metadata_column
> self._assertMetadataOutput(
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_optional_metadata_missing
> (q2cli.tests.test_cli.TestMetadataColumnSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 567, in test_optional_metadata_missing
> self._assertMetadataOutput(result, exp_tsv=None,
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_single_metadata (q2cli.tests.test_cli.TestMetadataColumnSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 599, in test_single_metadata
> self._assertMetadataOutput(
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_multiple_metadata (q2cli.tests.test_cli.TestMetadataSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 537, in test_multiple_metadata
> self._assertMetadataOutput(result, exp_tsv=exp_tsv,
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_optional_metadata_missing
> (q2cli.tests.test_cli.TestMetadataSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 483, in test_optional_metadata_missing
> self._assertMetadataOutput(result, exp_tsv=None,
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_single_metadata (q2cli.tests.test_cli.TestMetadataSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 495, in test_single_metadata
> self._assertMetadataOutput(
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_single_metadata_alt_id_header
> (q2cli.tests.test_cli.TestMetadataSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 516, in test_single_metadata_alt_id_header
> self._assertMetadataOutput(
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 453, in _assertMetadataOutput
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_all_optional_artifacts_provided
> (q2cli.tests.test_cli.TestOptionalArtifactSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 396, in test_all_optional_artifacts_provided
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_no_optional_artifacts_provided
> (q2cli.tests.test_cli.TestOptionalArtifactSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 375, in test_no_optional_artifacts_provided
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_one_optional_artifact_provided
> (q2cli.tests.test_cli.TestOptionalArtifactSupport)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_cli.py", line
> 385, in test_one_optional_artifact_provided
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ======================================================================
> FAIL: test_repeated_multiple_option (q2cli.tests.test_core.TestOption)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/q2cli/tests/test_core.py", line
> 119, in test_repeated_multiple_option
> self.assertEqual(result.exit_code, 0)
> AssertionError: 1 != 0
>
> ----------------------------------------------------------------------
> Ran 100 tests in 1.793s
>
> FAILED (errors=44, failures=17)
> E: pybuild pybuild:352: test: plugin custom failed with: exit code=1: cd
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build; HOME=/<<PKGBUILDDIR>>
> QIIMETEST= nosetests3
> dh_auto_test: error: pybuild --test --test-nose -i python{version} -p 3.8 -s
> custom "--test-args=cd {build_dir}; HOME=/<<PKGBUILDDIR>> QIIMETEST=
> nosetests3" returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2020/03/21/q2cli_2019.10.0-1_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
